PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022766224.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 312aa    MW: 35322.6 Da    PI: 8.5955
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022766224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.41.6e-082972344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT+eE + + +a +++ ++   +W ++a++++ g+t  +++  +
   XP_022766224.1 29 KWTPEENKCFENALALYDKDtpdRWFKVAAMIP-GKTVGDVIKQY 72
                     8********************************.***99998766 PP
2Myb_DNA-binding47.25.2e-15137181347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
   XP_022766224.1 137 PWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 181
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MMNRGLEILS PASYLQTSNW LFQESKGTKW TPEENKCFEN ALALYDKDTP DRWFKVAAMI  60
PGKTVGDVIK QYIELEEDVS DIEAGLIPIP GYSGDSFTLE WVNDSQGFDG FRHYYTPGGK  120
RGTGTRPSDQ ERKKGVPWTE EEHRQFLMGL KKYGKGDWRN ISRNFVTTRT PTQVASHAQK  180
YFIRQLTGGK DKRRSSIHDI TTVNIPDPPS SSPDHSKPLS PNNSSAVMQP QQLPKVAGVT  240
KELFDFEWKL QNEGAAMVFN QTSGINTFLS PFCGISSYGH KLEEQNTLKG TLPRSQFGSY  300
NTLFQMQSMQ RQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-124MYB family protein