PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022766319.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 336aa    MW: 38111.4 Da    PI: 9.2783
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022766319.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding574.4e-181762147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ede+l ++v+q+G  +W++Ia++++ gR++k+c++rw++ 
   XP_022766319.1 17 RGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQ-GRSGKSCRLRWFNQ 62
                     899*****************************.***********996 PP
2Myb_DNA-binding60.34.3e-1969112146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r ++T+eE+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+ 
   XP_022766319.1  69 RRPFTEEEEERLLAAHRIHGNK-WALIARLFP-GRTDNAVKNHWHV 112
                      679*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MDDSGAASVD DVKTCPRGHW RPAEDEKLRQ LVEQYGAQNW NSIAEKLQGR SGKSCRLRWF  60
NQLDPRINRR PFTEEEEERL LAAHRIHGNK WALIARLFPG RTDNAVKNHW HVIMARKQRE  120
QSKLCGKRSF QDGFSDSKLS STDFTPRKLA RCQEAFSSRI GFGESRFFEF QDPCKDRIFS  180
VSSSSTTSSP SWTFASSTIM ASNYSSLAEL SRRSYGKDYL LASGSSYYSM DSSKFLDQSL  240
YKHHSNASAY CSGFRNSSTF GIPNYRRVVP SPFGYLKLGD SYESNNGVMK ELMSFTDNAP  300
KFANIRVSNS QQEQEDESIK GKDVPFIDFL GVGISS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.18e-64MYB family protein