PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022766335.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 209aa    MW: 24374 Da    PI: 9.1278
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022766335.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.11.1e-28959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien+snrqvt+skRrngi+KKA+E+ v+Cda+v++iif+s+gk++ey+s
  XP_022766335.1  9 KRIENSSNRQVTYSKRRNGIMKKAKEITVMCDAKVSLIIFASSGKMHEYCS 59
                    79***********************************************96 PP
2K-box87.42.9e-2971167197
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     yqk+sgk+l++ak+e+l++e++++kke++n+q e+Rhl+Ged++sL +keL+ +e++Le++l+ iR+k++++l    ++++  e+++++ n   +
  XP_022766335.1  71 YQKTSGKKLWDAKHENLSNEIDRIKKENDNMQIELRHLKGEDITSLPYKELMAIEDALEHGLTCIRTKQMDVLDVTRKNTKFLEEDNKQLNFIVN 165
                     899****************************************************************************************9887 PP

           K-box  96 kk 97 
                     ++
  XP_022766335.1 166 QQ 167
                     76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MGRGKIEIKR IENSSNRQVT YSKRRNGIMK KAKEITVMCD AKVSLIIFAS SGKMHEYCSP  60
STTLIDILDQ YQKTSGKKLW DAKHENLSNE IDRIKKENDN MQIELRHLKG EDITSLPYKE  120
LMAIEDALEH GLTCIRTKQM DVLDVTRKNT KFLEEDNKQL NFIVNQQQIA YDNAREQMDG  180
GCQRAREYIS RMPFAFRVQP IQPNLQERM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.19e-93MIKC_MADS family protein