PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766367.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 575aa MW: 63236.6 Da PI: 6.4156

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766367.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.9	1.1e-24	116	217	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+ltpsd+++ g +++p+ +a+++ +++ + tl+++d +g +We+++iyr++++r++lt+GW++Fv++++L +gD+vvF+ ++ XP_022766367.1 116 FAKILTPSDANNGGGFSVPRFCADSIfppldynAEPPVQ--TLSVTDVRGCVWEFRHIYRGTPRRHLLTTGWSKFVNQKKLIAGDSVVFM--RDY 206 89*******************999985444444..9********************************************..568 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 +++++++v+r+ XP_022766367.1 207 NGKMFIGVRRA 217 899999986 PP
2	Auxin_resp	85.3	1.2e-28	255	338	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa++a+++ +FevvY+Pra++++Fvv++e ve+ l++ ++ G+R+kma+etedss+ ++ +Gtv++ d+ W +S+Wr+L+ XP_022766367.1 255 AAERAAKGLPFEVVYYPRAGWADFVVRAELVEAGLNIFWAGGTRVKMAVETEDSSRMTWfQGTVMSAAVPDSGPWIGSPWRMLQ 338 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MPPLQPSPTE VRRVDPRIWR ACAGSSVQIP TVNSRVYYFP QGHAEQVCGS IPTLSSLVLS 60 RPLIPCVISD VHCLTDPKTD EAFAKLLLIP VEPSRLTNQF LNINGEVGDS DKIVSFAKIL 120 TPSDANNGGG FSVPRFCADS IFPPLDYNAE PPVQTLSVTD VRGCVWEFRH IYRGTPRRHL 180 LTTGWSKFVN QKKLIAGDSV VFMRDYNGKM FIGVRRAMKT GESGGDSGRW RELSDGGTMK 240 GEGRGRMMAE VVAEAAERAA KGLPFEVVYY PRAGWADFVV RAELVEAGLN IFWAGGTRVK 300 MAVETEDSSR MTWFQGTVMS AAVPDSGPWI GSPWRMLQVA WDEPDVLQNA RRVSPWQVEI 360 VSSSPLHSSF PSAKRFKFSQ DSGLSDAGGE MFFPMTGLTN PKMGYLNPSL LNYNSFPAGM 420 QGARQNHLQS FTNYVSENIP MMPTDNFSGN YMVPKLNRIS TELNIGSSQS DNLSPDSQSS 480 VVSFGTELTE NGGCNSSKVG VSSFQLFGKM IHMKEPVGSR FDDVGFMEDD GGKRYDEAAS 540 EKKSLDVSLT YGCSKLLERL DVQCQRASAF EGFSL

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MPPLQPSPTE VRRVDPRIWR ACAGSSVQIP TVNSRVYYFP QGHAEQVCGS IPTLSSLVLS  60
RPLIPCVISD VHCLTDPKTD EAFAKLLLIP VEPSRLTNQF LNINGEVGDS DKIVSFAKIL  120
TPSDANNGGG FSVPRFCADS IFPPLDYNAE PPVQTLSVTD VRGCVWEFRH IYRGTPRRHL  180
LTTGWSKFVN QKKLIAGDSV VFMRDYNGKM FIGVRRAMKT GESGGDSGRW RELSDGGTMK  240
GEGRGRMMAE VVAEAAERAA KGLPFEVVYY PRAGWADFVV RAELVEAGLN IFWAGGTRVK  300
MAVETEDSSR MTWFQGTVMS AAVPDSGPWI GSPWRMLQVA WDEPDVLQNA RRVSPWQVEI  360
VSSSPLHSSF PSAKRFKFSQ DSGLSDAGGE MFFPMTGLTN PKMGYLNPSL LNYNSFPAGM  420
QGARQNHLQS FTNYVSENIP MMPTDNFSGN YMVPKLNRIS TELNIGSSQS DNLSPDSQSS  480
VVSFGTELTE NGGCNSSKVG VSSFQLFGKM IHMKEPVGSR FDDVGFMEDD GGKRYDEAAS  540
EKKSLDVSLT YGCSKLLERL DVQCQRASAF EGFSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77850.1	0.0	ARF family protein