PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766411.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 338aa MW: 37592.2 Da PI: 6.6738

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.8	7.2e-12	141	192	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r +h +Er+RR+++N+ + Lr+l+P++ + ++ + a+i A++++k+L+ XP_022766411.1 141 QRITHITVERNRRKQMNEYLGVLRSLMPPS---YVQRGDQASIIGGAINFVKELE 192 699*************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MALEAVVYSQ VPFSYACKDI YPVGGAGGGG TWGYDSFCFQ EEDKALIGIL DNNIEQKQGS 60 HLHAYWDSSS TSFIQHAKEW DLYSSPEACT VDQSLPAAGF QCPTEPSAAA TATTTTTTTN 120 STRRKRRRTR SSKNKEELEN QRITHITVER NRRKQMNEYL GVLRSLMPPS YVQRGDQASI 180 IGGAINFVKE LEQLLQSTEA HKRTSQQPEH NSNPSPFAEF FTFPQFSTRA TQCNNSHSMA 240 AEPMAAAESV ADIEVTMVET HANLKILSKK RPRQLLKLVA GLQSLRLTIL HLNVTTVEEM 300 ALYSISVKVE EGCHLNTVDE IAAAANQMLR RIQEEAAF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	128	RKRRR
2	124	129	RKRRRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	5e-89	bHLH family protein