PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022766433.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 267aa    MW: 30028.9 Da    PI: 8.0144
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022766433.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.51.3e-19122176256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ +++keq  +Le+ F+++++++ ++++ LA++l+L  rqV vWFqNrRa+ k
  XP_022766433.1 122 RKKLRLSKEQSAILEDSFKEHSTLNPKQKQALAQQLNLRPRQVEVWFQNRRARTK 176
                     788899***********************************************98 PP
2HD-ZIP_I/II125.32.7e-40122210190
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                     +kk+rlskeq+++LE+sF+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e Lk+++++l+een+rL+ke +eL+ +
  XP_022766433.1 122 RKKLRLSKEQSAILEDSFKEHSTLNPKQKQALAQQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKKCCETLTEENKRLQKELQELK-S 210
                     69*************************************************************************************9.4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MGFDDICNTG LGLGLGCLIK QENFSQSDHQ QKQKKLFLKH DHFFPFLTLG PSDEIYQSAT  60
KIGASKVHGE SIDLHQQASS LSAVSSFSNS SVKRERDFGG EEVELERVSS RVSDEDDEGS  120
PRKKLRLSKE QSAILEDSFK EHSTLNPKQK QALAQQLNLR PRQVEVWFQN RRARTKLKQT  180
EVDCELLKKC CETLTEENKR LQKELQELKS LKLTSSYYMK LPAATLTMCP SCERVANGGE  240
GPSTSIPFTI GQKSHFFNPF SHPSAAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171179RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.12e-50HD-ZIP family protein