PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766437.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRF

Protein Properties

Length: 605aa MW: 65492.8 Da PI: 7.3879

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766437.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.1	1.8e-24	222	266	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e XP_022766437.1 222 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKPVEG 266 79****************************************985 PP
2	QLQ	60	6.8e-21	152	188	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+y+y+ an+P+P++Ll +i+k XP_022766437.1 152 GPFTPSQWMELEHQALIYQYITANVPIPSNLLIPIRK 188 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 605 aa Download sequence
MDFGVVGLEG FEGSETTTTT GFTSLASDPE TKQKWYGSGF LKQERSGNNE DDWRSSKLAK 60 IDDFSASKAM LLQRRNTLLR SNTSIFSDGQ QQQQMLSFSA PKSEALSVDR SSQNVTFPYF 120 HLTSPAYTRN TAYNSGGLND ANVHGLLAGA RGPFTPSQWM ELEHQALIYQ YITANVPIPS 180 NLLIPIRKTL DSADFPSFSG GILRPNTLGW GAFHLGFSNN SDPEPGRCRR TDGKKWRCSR 240 DAVADQKYCE RHMNRGRHRS RKPVEGQSGH SAAAITATTT KLMPTVSSSS ASVVGPVGGC 300 GESNSLAIAQ QQFKNLQPGG ASNLSAAAPL NRSLLNKETV GERIHDTAPG LSMISPNVDL 360 KSKENPFLIL KNEFGVVSSD SLLNPSHKSS SLIKCRNFGS SQDLTSQETE SQQSLLQFMD 420 DWPKSQSDRS AISWPEVDVQ SDRTQLSISI PMAASDFMSS TSSPNNEKVT LSPLRLSREF 480 DPIHMGLGVG NVINEPNQRQ ANWIPISWET SMGGPLGEVL HSTNSSTADY KKSSALNLMT 540 EGWDNSPRLG SSPTGVLQKT TFGSLSNSSA GSSPRAENNK THEGASLCND LLGSTLIHSS 600 SLPAL

Sequence ? help Back to Top

Protein Sequence Length: 605 aa Download sequence

MDFGVVGLEG FEGSETTTTT GFTSLASDPE TKQKWYGSGF LKQERSGNNE DDWRSSKLAK  60
IDDFSASKAM LLQRRNTLLR SNTSIFSDGQ QQQQMLSFSA PKSEALSVDR SSQNVTFPYF  120
HLTSPAYTRN TAYNSGGLND ANVHGLLAGA RGPFTPSQWM ELEHQALIYQ YITANVPIPS  180
NLLIPIRKTL DSADFPSFSG GILRPNTLGW GAFHLGFSNN SDPEPGRCRR TDGKKWRCSR  240
DAVADQKYCE RHMNRGRHRS RKPVEGQSGH SAAAITATTT KLMPTVSSSS ASVVGPVGGC  300
GESNSLAIAQ QQFKNLQPGG ASNLSAAAPL NRSLLNKETV GERIHDTAPG LSMISPNVDL  360
KSKENPFLIL KNEFGVVSSD SLLNPSHKSS SLIKCRNFGS SQDLTSQETE SQQSLLQFMD  420
DWPKSQSDRS AISWPEVDVQ SDRTQLSISI PMAASDFMSS TSSPNNEKVT LSPLRLSREF  480
DPIHMGLGVG NVINEPNQRQ ANWIPISWET SMGGPLGEVL HSTNSSTADY KKSSALNLMT  540
EGWDNSPRLG SSPTGVLQKT TFGSLSNSSA GSSPRAENNK THEGASLCND LLGSTLIHSS  600
SLPAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	1e-117	GRF family protein