PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022766454.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 222aa    MW: 24623.9 Da    PI: 8.3987
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022766454.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26090.42.3e-282103197
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+vlr++C++ Cvl+  +      ++q +++ +++k+FG+s +l+l++a+pe +r+d+++sl++eA+ r+ +Pv+Gavg++++++++++q+
  XP_022766454.1   2 SCNGCRVLRKRCSDTCVLRSSLrwiesSQAQGNATLFLAKFFGRSDLLSLISAVPEPQRPDLFQSLLFEACGRTVNPVNGAVGLLSSGNWHICQA 96 
                     6*********************9998777888*************************************************************** PP

          DUF260  91 kaelall 97 
                     +++++l+
  XP_022766454.1  97 AVDTVLR 103
                     9998776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MSCNGCRVLR KRCSDTCVLR SSLRWIESSQ AQGNATLFLA KFFGRSDLLS LISAVPEPQR  60
PDLFQSLLFE ACGRTVNPVN GAVGLLSSGN WHICQAAVDT VLRGGDLLPI PGIFAGVWTP  120
NCDESSDRFG ANSCNFQSRY AQSKPLMTMM MMENQSASMT SDLSLSLTTK FGRGRRGTGR  180
RYEEEKKRDK TISFYSEESQ ITTFESNGTE GSQERKILNL FI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.12e-61LBD family protein