PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766484.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 245aa MW: 27538.7 Da PI: 8.8643

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766484.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59	1.1e-18	36	81	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v+++G+++W++I+r++ gR++k+c++rw + XP_022766484.1 36 KGPWSAEEDRILTRLVERYGPRNWSLISRYIK-GRSGKSCRLRWCNQ 81 79***************************9.*********985 PP
2	Myb_DNA-binding	55.9	9.6e-18	90	132	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ede ++ a++++G++ W+tIar ++ gRt++++k++w++ XP_022766484.1 90 PFSQAEDETILAAHARYGNR-WATIARLLP-GRTDNSVKNHWNST 132 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MEAMNGCSSS TSSSDASSSE TSFSARGASN KVEKIKGPWS AEEDRILTRL VERYGPRNWS 60 LISRYIKGRS GKSCRLRWCN QLSPNVEHRP FSQAEDETIL AAHARYGNRW ATIARLLPGR 120 TDNSVKNHWN STLKRRAREG QHHHHQQQQQ QLLLHQQEQI IQSHHQQMGG GDSALGSVGM 180 MMDEEALTAL TLAPPGSGSA VVAERSRSRE ERVPAEFWDV MRDVIAREVR EYMSSTLLAE 240 TSGFH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	5e-58	MYB family protein