PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022766513.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 225aa    MW: 25872.4 Da    PI: 9.2442
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022766513.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.44.3e-29959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k ien++nrqvt+skRrng++KKA+EL vLCda+v++i+fsstgkl+e++s
  XP_022766513.1  9 KLIENSTNRQVTYSKRRNGLFKKANELTVLCDARVSIIMFSSTGKLHEFIS 59
                    569**********************************************86 PP
2K-box94.91.3e-3171169199
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     yqk+ g +l+++++e++q++l++Lk+ ++nL++e+R+++Ge+L++ s+++L+ Leq++++s+k iR++K+++l +qi++++kk ++++e+nk+L 
  XP_022766513.1  71 YQKTLGIDLWNTHYEKMQEQLKQLKEVNRNLRKEIRQRMGECLNDVSIEDLRGLEQEMDSSVKLIRDRKYRVLNNQIDTSKKKVRNVKEINKNLL 165
                     78899999**************************************************************************************9 PP

           K-box  96 kkle 99 
                     ++l+
  XP_022766513.1 166 HELD 169
                     9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MARGKIQIKL IENSTNRQVT YSKRRNGLFK KANELTVLCD ARVSIIMFSS TGKLHEFISP  60
STSTKQLIDQ YQKTLGIDLW NTHYEKMQEQ LKQLKEVNRN LRKEIRQRMG ECLNDVSIED  120
LRGLEQEMDS SVKLIRDRKY RVLNNQIDTS KKKVRNVKEI NKNLLHELDA INEDPYGLVD  180
DGGDYDTIIG YQDGGPRIFA LSLQPNHPNL HSGGGSDLTT YPLLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.11e-87MIKC_MADS family protein