PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766652.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 252aa MW: 28672.2 Da PI: 6.5416

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766652.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87	1.1e-27	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien rqvtfskRrng+lKKA ELS+LCdaev viifsstgk+y +ss XP_022766652.1 9 KKIENLNSRQVTFSKRRNGLLKKARELSILCDAEVGVIIFSSTGKVYQWSS 59 68***********************************************96 PP
2	K-box	56.2	1.5e-19	81	172	9	100
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +e + ++s +++ Lk+e+ L+ +l G++L+ Ls+keLqqLe+qL++++ +++++K+++lleq+++++ +e+++ en++Lrk++ee XP_022766652.1 81 VERKAESSQPVDVNTLKEEYLRLRAAYMRLNGKELDGLSFKELQQLEHQLNEGMLSVKEQKEQILLEQLKRSRLQEQKAILENETLRKQVEE 172 5555566667899****************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 252 aa Download sequence
MGRGKIEIKK IENLNSRQVT FSKRRNGLLK KARELSILCD AEVGVIIFSS TGKVYQWSST 60 SMEHTLLRYN KGMGVDQSPS VERKAESSQP VDVNTLKEEY LRLRAAYMRL NGKELDGLSF 120 KELQQLEHQL NEGMLSVKEQ KEQILLEQLK RSRLQEQKAI LENETLRKQV EELRQNKSSN 180 LLEFNPLQIR FSPTSSKPDY SCDSEDEDDD NGDNDHSDTS LHLGLTSDVG RKRKVAKIEP 240 VSNDSGSQVA SE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57390.1	2e-66	MIKC_MADS family protein