PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766775.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 390aa MW: 41753.1 Da PI: 9.5393

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766775.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	138.8	1.6e-43	90	165	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC++dls+ak y++rhkvC +hsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+ XP_022766775.1 90 RCQVEGCKVDLSDAKAYYSRHKVCGMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKP 165 6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MEMGSGSLGE SGGSSTNSST ESLNGLKFGK KIYFEDAAAG APPAAAATAI AAGGSNVGTP 60 SKSGPGSSSS SRSGRKARVG GVVQGAQPPR CQVEGCKVDL SDAKAYYSRH KVCGMHSKSP 120 KVIVAGLEQR FCQQCSRFHQ LPEFDQGKRS CRRRLAGHNE RRRKPPPGSL LPSRYSRLSS 180 SIIESSRDGS FIMDFTAYPR HSSRDVWPTA RSSEYLPGNQ NTAAARSLPH PWQNNSENPR 240 PDLFMQGSPG GTVFSSTEIT PGQCFTGVGD SSCALSLLSN QPWGSRNRAS SLGVNNMINT 300 ERYSAAQPAT RHGAVVNPYS NASWGFKGND SGSSSHEMAP QLGLGQISEP VVNSQFSGGP 360 EFCQQSRRQY MELEQSRAYD TSTQDIHWSL

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MEMGSGSLGE SGGSSTNSST ESLNGLKFGK KIYFEDAAAG APPAAAATAI AAGGSNVGTP  60
SKSGPGSSSS SRSGRKARVG GVVQGAQPPR CQVEGCKVDL SDAKAYYSRH KVCGMHSKSP  120
KVIVAGLEQR FCQQCSRFHQ LPEFDQGKRS CRRRLAGHNE RRRKPPPGSL LPSRYSRLSS  180
SIIESSRDGS FIMDFTAYPR HSSRDVWPTA RSSEYLPGNQ NTAAARSLPH PWQNNSENPR  240
PDLFMQGSPG GTVFSSTEIT PGQCFTGVGD SSCALSLLSN QPWGSRNRAS SLGVNNMINT  300
ERYSAAQPAT RHGAVVNPYS NASWGFKGND SGSSSHEMAP QLGLGQISEP VVNSQFSGGP  360
EFCQQSRRQY MELEQSRAYD TSTQDIHWSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	2e-63	SBP family protein