PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022766832.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 347aa MW: 38260.9 Da PI: 9.5063

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022766832.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55	1.4e-17	178	232	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k XP_022766832.1 178 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 232 778899***********************************************98 PP
2	HD-ZIP_I/II	127.9	4.3e-41	178	268	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk XP_022766832.1 178 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR-ALK 268 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MELALSLGEP SKPFSFLNKT PKLTSKNLGF CMVLGNGFRS QEKGVAFEGG SRGEASRDGD 60 HDKRFSSDPP RQLDLLPFSP VPRTQPSSQL RFRWLTNNQT GSSEGPGRGL DVNRLPVVAM 120 ADEAEEGAAL SSPNSAVSSF QMDFGIRNGS SIGKRDLEVE TERASSRASD DDENGSTRKK 180 LRLSKEQSAF LEESFKEHNT LNPKQKLALA KQLNLRPRQV EVWFQNRRAR TKLKQTEVDC 240 EYLKRCCETL TEENRRLQKE LQELRALKTS QPFYMQLPAT TLTMCPSCER VATTSTTNAS 300 AAAAAPSGSN TDAKTGGLTL TKTRGYPFSP IQTHVTQSQP QAHQAAS

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MELALSLGEP SKPFSFLNKT PKLTSKNLGF CMVLGNGFRS QEKGVAFEGG SRGEASRDGD  60
HDKRFSSDPP RQLDLLPFSP VPRTQPSSQL RFRWLTNNQT GSSEGPGRGL DVNRLPVVAM  120
ADEAEEGAAL SSPNSAVSSF QMDFGIRNGS SIGKRDLEVE TERASSRASD DDENGSTRKK  180
LRLSKEQSAF LEESFKEHNT LNPKQKLALA KQLNLRPRQV EVWFQNRRAR TKLKQTEVDC  240
EYLKRCCETL TEENRRLQKE LQELRALKTS QPFYMQLPAT TLTMCPSCER VATTSTTNAS  300
AAAAAPSGSN TDAKTGGLTL TKTRGYPFSP IQTHVTQSQP QAHQAAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	177	183	TRKKLRL
2	227	235	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	2e-86	HD-ZIP family protein