PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022767009.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 737aa    MW: 81315.6 Da    PI: 7.0401
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022767009.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.62.9e-202782156
                    TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++ +++t++q+++Le +F+++++p++++r +L+++lgL  rq+k+WFqNrR+++k
  XP_022767009.1 27 KKRYHRHTAHQIQRLEGMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMK 82
                    678899***********************************************998 PP
2START170.41.2e-532274472205
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     +a  a +el+++ + +ep+W ks     + +n + + ++f+++ +       ++ea+r+sgvv+m+   lv  ++d+  +W e ++     a+t+
  XP_022767009.1 227 IAANAIEELLRLLQTNEPLWIKSTtdgrDVLNLESYERIFPRASThfkspnVRIEASRDSGVVIMNGLALVDMFMDSD-KWVELFPtivsMAKTI 320
                     577899******************99999999999999**9988899**999**************************.******999999**** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     evissg      g lqlm+ elq+lsplv+ R+f+++R+++q ++g w+iv vS d +q+ +      R+++lpSg+li++++ng+ kvtwvehv
  XP_022767009.1 321 EVISSGtlgshsGSLQLMYEELQVLSPLVStREFYILRHCQQIEQGLWAIVNVSYDFPQFASH----CRSRRLPSGCLIQDMPNGYAKVTWVEHV 411
                     ************************************************************885....9*************************** PP

                     E--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
           START 171 dlkgrlp.hwllrslvksglaegaktwvatlqrqce 205
                     ++++++p h l+r l++ gla+ga +w+atlqr ce
  XP_022767009.1 412 EVEDKTPtHRLYRDLIQGGLAFGAERWLATLQRMCE 447
                     *********************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 737 aa     Download sequence    
MEFGSSGGGG GSGSGGDHDA SDPSRRKKRY HRHTAHQIQR LEGMFKECPH PDEKQRLQLS  60
RELGLAPRQI KFWFQNRRTQ MKAQHERADN CSLRSENDKI RCENIAIREA LKNVICPSCG  120
GPPVNEDSYF DDQKLRMENA QLKEELDRVS SIAAKYIGRP ISQLPPVQPI HISSLDLRMA  180
SFDGHGIGVA GPSLDLDLLP GSSSAMPNLP FQPVVISDMD KSLMTDIAAN AIEELLRLLQ  240
TNEPLWIKST TDGRDVLNLE SYERIFPRAS THFKSPNVRI EASRDSGVVI MNGLALVDMF  300
MDSDKWVELF PTIVSMAKTI EVISSGTLGS HSGSLQLMYE ELQVLSPLVS TREFYILRHC  360
QQIEQGLWAI VNVSYDFPQF ASHCRSRRLP SGCLIQDMPN GYAKVTWVEH VEVEDKTPTH  420
RLYRDLIQGG LAFGAERWLA TLQRMCEWFA CLMVSGTSTR DLGGVIPSPD GKRSMMKLAQ  480
RMVNNFCTSI STSNSHRWTT LSGLNEVGVR VTVHKSSDPG QPNGVVLSAA TTFWLPVTPQ  540
NVFIFFKDER TRPQWDVLSN GNAVQEVAHI ANGSHPGNCI SVLRVRLLKL LKHFPLFYFN  600
ALSNCFLNAF NTSQNNMLIL QESCIDRSGS LVVYCPVDLP AINLAMSGED PSYIPLLPSG  660
FTISPDGHPD QGDGASTSSS ANGNMGRSGG SLITIAFQIL VSSLPSAKLN MESVTTVNNL  720
IGTTVQQIKA ALNSPSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein