PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022767012.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 446aa MW: 48952.8 Da PI: 6.5117

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022767012.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	63.7	7e-20	41	95	4	58
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpa 58 ++ + ++h kv+gRdRR+R++++c +F L++e G+ ++++ti+WLlqq+ p XP_022767012.1 41 RRNKGADRHIKVEGRDRRIRIPLTCCSGLFRLTREMGHRTNGQTIQWLLQQSRPD 95 4556679*********************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MDLQTRTVDQ QQLEYEQQSL LPGNGEQEAG PASIQPIKKR RRNKGADRHI KVEGRDRRIR 60 IPLTCCSGLF RLTREMGHRT NGQTIQWLLQ QSRPDLVLPD PMSHPSRVIA SSPGCMAKGR 120 VRATVVQAST VFFDTPATLD KAERLIAGAA AYGSQLVVFP EAFVGGYPRG LSFESLPVSA 180 TSTEDNEDFL KYHASAIEVP GPEADRLATI AGKYKVHLVV GVVERTGFYL FSTILFFDSM 240 GRYLGKHRKL MPIASEWVVW CSGEKSSLPL YGTTIGKVGG LLYWDNRIPS LRTELYAKGI 300 EIYCAPTADA REEWRASMIH IAIEGSCFVL SANQFCRRKD YPPPLKCIDG DSNGDLSLDT 360 IMCSGGSVIV SPSGTILAGP NYQGESLISA DLDLEEINRA KLEFSELGHS LEPDSLGCAA 420 NRPNTVLFPT AVKTEALDDL LWSPGL

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MDLQTRTVDQ QQLEYEQQSL LPGNGEQEAG PASIQPIKKR RRNKGADRHI KVEGRDRRIR  60
IPLTCCSGLF RLTREMGHRT NGQTIQWLLQ QSRPDLVLPD PMSHPSRVIA SSPGCMAKGR  120
VRATVVQAST VFFDTPATLD KAERLIAGAA AYGSQLVVFP EAFVGGYPRG LSFESLPVSA  180
TSTEDNEDFL KYHASAIEVP GPEADRLATI AGKYKVHLVV GVVERTGFYL FSTILFFDSM  240
GRYLGKHRKL MPIASEWVVW CSGEKSSLPL YGTTIGKVGG LLYWDNRIPS LRTELYAKGI  300
EIYCAPTADA REEWRASMIH IAIEGSCFVL SANQFCRRKD YPPPLKCIDG DSNGDLSLDT  360
IMCSGGSVIV SPSGTILAGP NYQGESLISA DLDLEEINRA KLEFSELGHS LEPDSLGCAA  420
NRPNTVLFPT AVKTEALDDL LWSPGL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	37	44	IKKRRRNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	2e-18	TCP family protein