PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022767013.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 399aa MW: 43493.3 Da PI: 5.3131

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022767013.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	63.9	5.8e-20	41	95	4	58
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpa 58 ++ + ++h kv+gRdRR+R++++c +F L++e G+ ++++ti+WLlqq+ p XP_022767013.1 41 RRNKGADRHIKVEGRDRRIRIPLTCCSGLFRLTREMGHRTNGQTIQWLLQQSRPD 95 4556679*********************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MDLQTRTVDQ QQLEYEQQSL LPGNGEQEAG PASIQPIKKR RRNKGADRHI KVEGRDRRIR 60 IPLTCCSGLF RLTREMGHRT NGQTIQWLLQ QSRPDLVLPD PMSHPSRVIA SSPGCMAKGR 120 VRATVVQAST VFFDTPATLD KAERLIAGAA AYGSQLVVFP EAFVGGYPRG LSFESLPVSA 180 TSTEDNEDFL KYHASAIEVP GPEADRLATI AVWCSGEKSS LPLYGTTIGK VGGLLYWDNR 240 IPSLRTELYA KGIEIYCAPT ADAREEWRAS MIHIAIEGSC FVLSANQFCR RKDYPPPLKC 300 IDGDSNGDLS LDTIMCSGGS VIVSPSGTIL AGPNYQGESL ISADLDLEEI NRAKLEFSEL 360 GHSLEPDSLG CAANRPNTVL FPTAVKTEAL DDLLWSPGL

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MDLQTRTVDQ QQLEYEQQSL LPGNGEQEAG PASIQPIKKR RRNKGADRHI KVEGRDRRIR  60
IPLTCCSGLF RLTREMGHRT NGQTIQWLLQ QSRPDLVLPD PMSHPSRVIA SSPGCMAKGR  120
VRATVVQAST VFFDTPATLD KAERLIAGAA AYGSQLVVFP EAFVGGYPRG LSFESLPVSA  180
TSTEDNEDFL KYHASAIEVP GPEADRLATI AVWCSGEKSS LPLYGTTIGK VGGLLYWDNR  240
IPSLRTELYA KGIEIYCAPT ADAREEWRAS MIHIAIEGSC FVLSANQFCR RKDYPPPLKC  300
IDGDSNGDLS LDTIMCSGGS VIVSPSGTIL AGPNYQGESL ISADLDLEEI NRAKLEFSEL  360
GHSLEPDSLG CAANRPNTVL FPTAVKTEAL DDLLWSPGL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	37	44	IKKRRRNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	2e-18	TCP family protein