PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022767039.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 484aa MW: 53961.2 Da PI: 8.0525

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022767039.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1.1e-16	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a +++G g W+ I +++g ++t+ q++s+ qk+ XP_022767039.1 59 REKWTEEEHQKFLEALRLYGRG-WRQIEEHVG-TKTAVQIRSHAQKF 103 789*****************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MATQDQIEGT TLPNALKSGI CSSNVSPQSE TLTQLQEIYK FRHDHTPKVR KPYTITKQRE 60 KWTEEEHQKF LEALRLYGRG WRQIEEHVGT KTAVQIRSHA QKFFSKVVRH SNVGFEDSIK 120 PVEIPPPRPK RKPIHPYPRK SVDSFKGISS SSQYERSPSP NKFVREQDNK SPTSVLSAFA 180 SDAMGSAASE QQNGCSSPTS CTTNMQSINT SPVEKENDYV TSTSSAEEEK TSLSSGKVFG 240 HLAVEDILPT KFNEDFKNSM CAKGNAAIVV PFTSIKLFGK TVQVKDSPEP SIGAENFKSS 300 TSKSGQEDVN AVSEMLVQAL PATYLDTHLS LGTVINNWNV VPSRANLSPY REIHPDKNDH 360 VESTRDASLP WWAFYQGLPF YYITSFNQTP TDSCVEEMMN EKEILKERSC SGSNTGSVSQ 420 AENREKTSYS VDSKCQYPCP GGKTTPQKCS KGFVPYKRCL AERDTSSSVL ASEEQERQRA 480 RVCS

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MATQDQIEGT TLPNALKSGI CSSNVSPQSE TLTQLQEIYK FRHDHTPKVR KPYTITKQRE  60
KWTEEEHQKF LEALRLYGRG WRQIEEHVGT KTAVQIRSHA QKFFSKVVRH SNVGFEDSIK  120
PVEIPPPRPK RKPIHPYPRK SVDSFKGISS SSQYERSPSP NKFVREQDNK SPTSVLSAFA  180
SDAMGSAASE QQNGCSSPTS CTTNMQSINT SPVEKENDYV TSTSSAEEEK TSLSSGKVFG  240
HLAVEDILPT KFNEDFKNSM CAKGNAAIVV PFTSIKLFGK TVQVKDSPEP SIGAENFKSS  300
TSKSGQEDVN AVSEMLVQAL PATYLDTHLS LGTVINNWNV VPSRANLSPY REIHPDKNDH  360
VESTRDASLP WWAFYQGLPF YYITSFNQTP TDSCVEEMMN EKEILKERSC SGSNTGSVSQ  420
AENREKTSYS VDSKCQYPCP GGKTTPQKCS KGFVPYKRCL AERDTSSSVL ASEEQERQRA  480
RVCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	3e-47	MYB_related family protein