PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022767175.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 305aa MW: 33006.8 Da PI: 4.3421

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022767175.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.7	4.2e-05	278	301	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ Cg+sF + L++H + H XP_022767175.1 278 FPCKSCGRSFGSENALQSHSKAkH 301 89*****************88777 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MEFWGAEVKS GQNFEVELED DGNRILHVSQ VALGEVIGDN KKEKGKETVC IYLKFKNEKF 60 VIGTLSQEKF PQIPLDLVLH DKFELSHTWK NGSVYFTGYY VDTSQGGDTE SEEELPEPTT 120 NPIKPHATVS DPTTSKQVKI VEPKKDEDGS DDEDEDDSSD EDEESGEDQE PGMQVNGENE 180 SDDDTDSDED DSEEESSDED QETPGKAGPS KKRSAESATK TPAPEKKAKL VTPEKTVLGA 240 DGKKVSGHTA TPHPSKQAGK ATAAAAQMKQ TPKLGGSFPC KSCGRSFGSE NALQSHSKAK 300 HGGAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03740.1	4e-28	C2H2 family protein