PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022767187.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 474aa MW: 51752.2 Da PI: 6.5734

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022767187.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	60.1	5.5e-19	98	184	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L+ea+ e+ ++l+rg+lk+ +Weev++++ r ++ ++s +qCk+k +nl+kryk ++++++++ +ss++p+f+++e XP_022767187.1 98 EWSDAAIGCLLEAYMEKLTQLNRGNLKGRDWEEVAAAVteRCEKQSKSVEQCKNKVDNLKKRYKLERHRMSDG-GIASSHWPWFKKME 184 5***********************************777778899*********************9.66777******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MASSVDDDFS LLDDHQTNPN LHHHHPSYAQ IHAPPPDNQD ADDDSDSGFR GANFGNNNNN 60 AISSDVRIEK RRDQEEINDG VLKRPKQSTT EYRKDREEWS DAAIGCLLEA YMEKLTQLNR 120 GNLKGRDWEE VAAAVTERCE KQSKSVEQCK NKVDNLKKRY KLERHRMSDG GIASSHWPWF 180 KKMEEIVGNS LPVKAVADED KGGASPGTAV RQSKRYASAT PSPVGQIISM KSKSPKWRRV 240 VFKISGAALG CTGPQNIDPK VAMLIAREVA IACHLGVEVA IVVGGRNFFC GDTWVTATGL 300 DRSTAYQIGM MASVMNSILL QSSLEKMGVQ TLVQTALSLP EVAEPYSRQR AIRHLEKGRV 360 VIFGGIGAGT GNPLFSTDTA AALRASEIHA EAVLKGTNVD GVYDCHSQDN NATFEHISFR 420 ELVSRGATAM DMMALTFCEE NGVPVVVFNL LQPGNISKAL CGDQVEGNKP IDGA

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MASSVDDDFS LLDDHQTNPN LHHHHPSYAQ IHAPPPDNQD ADDDSDSGFR GANFGNNNNN  60
AISSDVRIEK RRDQEEINDG VLKRPKQSTT EYRKDREEWS DAAIGCLLEA YMEKLTQLNR  120
GNLKGRDWEE VAAAVTERCE KQSKSVEQCK NKVDNLKKRY KLERHRMSDG GIASSHWPWF  180
KKMEEIVGNS LPVKAVADED KGGASPGTAV RQSKRYASAT PSPVGQIISM KSKSPKWRRV  240
VFKISGAALG CTGPQNIDPK VAMLIAREVA IACHLGVEVA IVVGGRNFFC GDTWVTATGL  300
DRSTAYQIGM MASVMNSILL QSSLEKMGVQ TLVQTALSLP EVAEPYSRQR AIRHLEKGRV  360
VIFGGIGAGT GNPLFSTDTA AALRASEIHA EAVLKGTNVD GVYDCHSQDN NATFEHISFR  420
ELVSRGATAM DMMALTFCEE NGVPVVVFNL LQPGNISKAL CGDQVEGNKP IDGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	0.0	Trihelix family protein