PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022767190.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 479aa MW: 54576.7 Da PI: 6.2142

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022767190.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	78.4	1.1e-24	111	210	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpy 81 +Wt+++v++Li a+ +++++++++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +++ +++++++ ++ XP_022767190.1 111 KWTDNMVKLLIMAVYYIGDEIGSEGndptgkkkaggllQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGRGtACRVVENQSL 205 7**************999996433677778999999******************************************559****** PP trihelix 82 fdqle 86 +d ++ XP_022767190.1 206 LDTMD 210 *9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
METNALPGGM FSGIGSGMLG LETPLHPQQQ QPQNLQSAQN PHNLHHHSQM VAFSHRETDH 60 SQHQQSVKQG YPFVSKTKRT SPLSDEDEPG FTHDDGAADA KRKFSPWQRM KWTDNMVKLL 120 IMAVYYIGDE IGSEGNDPTG KKKAGGLLQK KGKWKSVSRA MMEKGFYVSP QQCEDKFNDL 180 NKRYKRVNDI LGRGTACRVV ENQSLLDTMD LSPKMKEEVK KLLNSKHLFF REMCAYHSSC 240 GHGAAAGTSG ANHSPEVATE TSQIQHQQAQ QQRCLHSSDN AQIAGNSGRI ETEVPKLSKV 300 GSEEEDDDED DDEDDDEDDD EDVEEAMDGH SRGQEDDEEN DEKSSRKRPR KGAFAMSLSP 360 LMQQLSSEVM NVIQDGSRSA WEKKHWMKMR LMQLEEQQVS YQYKAFELEK QRLKWVKFSG 420 KKEREMERAK LENERSRLEN ERMGLLVRQK ELELVDLQRH NRPQQHSSNK MGDPSSITV

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

METNALPGGM FSGIGSGMLG LETPLHPQQQ QPQNLQSAQN PHNLHHHSQM VAFSHRETDH  60
SQHQQSVKQG YPFVSKTKRT SPLSDEDEPG FTHDDGAADA KRKFSPWQRM KWTDNMVKLL  120
IMAVYYIGDE IGSEGNDPTG KKKAGGLLQK KGKWKSVSRA MMEKGFYVSP QQCEDKFNDL  180
NKRYKRVNDI LGRGTACRVV ENQSLLDTMD LSPKMKEEVK KLLNSKHLFF REMCAYHSSC  240
GHGAAAGTSG ANHSPEVATE TSQIQHQQAQ QQRCLHSSDN AQIAGNSGRI ETEVPKLSKV  300
GSEEEDDDED DDEDDDEDDD EDVEEAMDGH SRGQEDDEEN DEKSSRKRPR KGAFAMSLSP  360
LMQQLSSEVM NVIQDGSRSA WEKKHWMKMR LMQLEEQQVS YQYKAFELEK QRLKWVKFSG  420
KKEREMERAK LENERSRLEN ERMGLLVRQK ELELVDLQRH NRPQQHSSNK MGDPSSITV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	9e-49	Trihelix family protein