PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022767191.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 470aa MW: 53755.9 Da PI: 6.3024

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022767191.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	78.5	1e-24	102	201	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpy 81 +Wt+++v++Li a+ +++++++++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +++ +++++++ ++ XP_022767191.1 102 KWTDNMVKLLIMAVYYIGDEIGSEGndptgkkkaggllQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGRGtACRVVENQSL 196 7**************999996433677778999999******************************************559****** PP trihelix 82 fdqle 86 +d ++ XP_022767191.1 197 LDTMD 201 *9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MVVSSLLGML GLETPLHPQQ QQPQNLQSAQ NPHNLHHHSQ MVAFSHRETD HSQHQQSVKQ 60 GYPFVSKTKR TSPLSDEDEP GFTHDDGAAD AKRKFSPWQR MKWTDNMVKL LIMAVYYIGD 120 EIGSEGNDPT GKKKAGGLLQ KKGKWKSVSR AMMEKGFYVS PQQCEDKFND LNKRYKRVND 180 ILGRGTACRV VENQSLLDTM DLSPKMKEEV KKLLNSKHLF FREMCAYHSS CGHGAAAGTS 240 GANHSPEVAT ETSQIQHQQA QQQRCLHSSD NAQIAGNSGR IETEVPKLSK VGSEEEDDDE 300 DDDEDDDEDD DEDVEEAMDG HSRGQEDDEE NDEKSSRKRP RKGAFAMSLS PLMQQLSSEV 360 MNVIQDGSRS AWEKKHWMKM RLMQLEEQQV SYQYKAFELE KQRLKWVKFS GKKEREMERA 420 KLENERSRLE NERMGLLVRQ KELELVDLQR HNRPQQHSSN KMGDPSSITV

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MVVSSLLGML GLETPLHPQQ QQPQNLQSAQ NPHNLHHHSQ MVAFSHRETD HSQHQQSVKQ  60
GYPFVSKTKR TSPLSDEDEP GFTHDDGAAD AKRKFSPWQR MKWTDNMVKL LIMAVYYIGD  120
EIGSEGNDPT GKKKAGGLLQ KKGKWKSVSR AMMEKGFYVS PQQCEDKFND LNKRYKRVND  180
ILGRGTACRV VENQSLLDTM DLSPKMKEEV KKLLNSKHLF FREMCAYHSS CGHGAAAGTS  240
GANHSPEVAT ETSQIQHQQA QQQRCLHSSD NAQIAGNSGR IETEVPKLSK VGSEEEDDDE  300
DDDEDDDEDD DEDVEEAMDG HSRGQEDDEE NDEKSSRKRP RKGAFAMSLS PLMQQLSSEV  360
MNVIQDGSRS AWEKKHWMKM RLMQLEEQQV SYQYKAFELE KQRLKWVKFS GKKEREMERA  420
KLENERSRLE NERMGLLVRQ KELELVDLQR HNRPQQHSSN KMGDPSSITV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	6e-49	Trihelix family protein