PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022767268.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 239aa MW: 27757.8 Da PI: 5.4382

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022767268.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.8	5e-18	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEde+l+ vk+lG+++W+ +ar g++R++k+c++rw++yl XP_022767268.1 16 KGPWHEEEDERLITFVKLLGSRRWDYVARASGLKRSGKSCRLRWLNYL 63 79********************************************97 PP
2	Myb_DNA-binding	46.3	9.8e-15	73	114	5	48
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++eE+++++++++++G++ W+ Iar+++ gRt++++k++ +++l XP_022767268.1 73 SAEEEKIILQLHERWGNK-WSMIARRLP-GRTDNEIKNYCRTHL 114 89**************.*****.*********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MAYETVAAMQ GESLRKGPWH EEEDERLITF VKLLGSRRWD YVARASGLKR SGKSCRLRWL 60 NYLRPNIKHG HISAEEEKII LQLHERWGNK WSMIARRLPG RTDNEIKNYC RTHLRKKAVI 120 QEQVETFQFG RDNGKQLFLF QEDGSSSQTC NGESYKPCVD TLDNENGSYE TVELSDFALT 180 SSPYQTRLSD WISEFPSDQS EIKSQGESNS TDSLYCYPTW VSYEENDLWG CSGSLWNLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53200.1	1e-65	MYB family protein