PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022767325.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 482aa MW: 54260.5 Da PI: 8.5322

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022767325.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.7	1.5e-09	351	398	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT eE +lvd+++++G g+W+ I r + Rt+ +++++w+++l XP_022767325.1 351 WTLEEVIKLVDGIAEYGVGRWTDIKRLLFassAYRTPVDLRDKWRNLL 398 ******************************99**********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MKMDRKPHLI KKLADVKRQR VDESIVPGSE EATEVEHLLV EPKSEHVSVD GVLCFGKENI 60 EKHLKMEDFS CAFDYGWKIS CGGLDSIHGL GGDDLKLEVL DGLLDEVDEV DDIHAAHDLS 120 GACEDFLLDI EFPEKFSELD CGPQEGSNLH NSSSESHSPG FSGSSNSAGG ISELSIATIQ 180 ESNSNNGVLG KMVSCDLHHT FRSRCGCQAP VMDTIRPTIK HVQDVVESDD DEKPLINYIL 240 SNKKVKCSVK VSKGGTLLRQ KRLRKPTRRY IEEFSRNSTS AKNKRFKVRS EEEHPQVPSE 300 SRQRRGRPKK IMPKPELESD CELSASESED ECKGTKKSKT ACDRRKHQRM WTLEEVIKLV 360 DGIAEYGVGR WTDIKRLLFA SSAYRTPVDL RDKWRNLLRS SSAHKHNRRE LQVETNLKHA 420 VRSLPKPVVC RIRELATIHP YPKVRGPKIS SVDYVPSSKQ STTTKGAPVY SHGRNLRRKK 480 CS

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MKMDRKPHLI KKLADVKRQR VDESIVPGSE EATEVEHLLV EPKSEHVSVD GVLCFGKENI  60
EKHLKMEDFS CAFDYGWKIS CGGLDSIHGL GGDDLKLEVL DGLLDEVDEV DDIHAAHDLS  120
GACEDFLLDI EFPEKFSELD CGPQEGSNLH NSSSESHSPG FSGSSNSAGG ISELSIATIQ  180
ESNSNNGVLG KMVSCDLHHT FRSRCGCQAP VMDTIRPTIK HVQDVVESDD DEKPLINYIL  240
SNKKVKCSVK VSKGGTLLRQ KRLRKPTRRY IEEFSRNSTS AKNKRFKVRS EEEHPQVPSE  300
SRQRRGRPKK IMPKPELESD CELSASESED ECKGTKKSKT ACDRRKHQRM WTLEEVIKLV  360
DGIAEYGVGR WTDIKRLLFA SSAYRTPVDL RDKWRNLLRS SSAHKHNRRE LQVETNLKHA  420
VRSLPKPVVC RIRELATIHP YPKVRGPKIS SVDYVPSSKQ STTTKGAPVY SHGRNLRRKK  480
CS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	2e-24	MYB_related family protein