PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022767344.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 709aa MW: 78234 Da PI: 7.5387

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022767344.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.3	1.4e-23	121	222	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ +d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF + + XP_022767344.1 121 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFL--RAE 211 89**************************996555555..89*******************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_022767344.1 212 NGDLCVGIRRA 222 8999**997 PP
2	Auxin_resp	114.9	7e-38	290	373	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a++++ FevvY+Prast+eF+vk++++++al+++++ GmRfkmafetedss++++ +Gt+++v+ +dp+rWp+S+Wr+L+ XP_022767344.1 290 AATLAANGQQFEVVYYPRASTPEFCVKASSMKAALQIRWCSGMRFKMAFETEDSSRISWfMGTISSVQVADPLRWPDSPWRLLQ 373 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 709 aa Download sequence
MITFMDSKEK LKEMEKYLDS QLWHACAGGM VQMPSVNAKV FYFPQGHAEH ACGPVDFRNC 60 PRLPAYILCR VFAVKFMADP ETDEVFAKIR LIPVSTSEPD FEDDGIGSIH GNETQEKPAS 120 FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSADPPVQT ILAKDVHGET WKFRHIYRGT 180 PRRHLLTTGW STFVNHKKLV AGDSIVFLRA ENGDLCVGIR RAKRGIGGGP ESSSGWNATA 240 GNCMVPYGGF SAFLREDENK LMRNGSSNGL SSNSNLMGKR KVRPEQVIEA ATLAANGQQF 300 EVVYYPRAST PEFCVKASSM KAALQIRWCS GMRFKMAFET EDSSRISWFM GTISSVQVAD 360 PLRWPDSPWR LLQVTWDEPD LLQNVKRVNP WLVELVSNMP AIHLSPFSPP RKKLRLPQHP 420 DFPLDGQLPM PTFSGNLLGH SNHFGCLPNT TPAGMQGARH AHYGVSLSDL HLNKLQSGLF 480 PASFPPLDLA ATPSRTSNGG PIVKKPAMSE NVSCVLTMAH SIRNSKKTDD VKTSQLVLFG 540 QPILTEQQIS LSCSGDTVSP VLTGNSSSEG NLDKMAKFSD GSGSALHQQG LPERTFCEGL 600 PWYKDMRQEA EPNLETGHCK IFMESEDVGR TLDLSLLESY SELLKKLADM FGIENSETLS 660 HLLYRDATGA VKQIGDEPIS DFKKTARRLT ILMDSSSDNV GGCRGRNKP

Sequence ? help Back to Top

Protein Sequence Length: 709 aa Download sequence

MITFMDSKEK LKEMEKYLDS QLWHACAGGM VQMPSVNAKV FYFPQGHAEH ACGPVDFRNC  60
PRLPAYILCR VFAVKFMADP ETDEVFAKIR LIPVSTSEPD FEDDGIGSIH GNETQEKPAS  120
FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSADPPVQT ILAKDVHGET WKFRHIYRGT  180
PRRHLLTTGW STFVNHKKLV AGDSIVFLRA ENGDLCVGIR RAKRGIGGGP ESSSGWNATA  240
GNCMVPYGGF SAFLREDENK LMRNGSSNGL SSNSNLMGKR KVRPEQVIEA ATLAANGQQF  300
EVVYYPRAST PEFCVKASSM KAALQIRWCS GMRFKMAFET EDSSRISWFM GTISSVQVAD  360
PLRWPDSPWR LLQVTWDEPD LLQNVKRVNP WLVELVSNMP AIHLSPFSPP RKKLRLPQHP  420
DFPLDGQLPM PTFSGNLLGH SNHFGCLPNT TPAGMQGARH AHYGVSLSDL HLNKLQSGLF  480
PASFPPLDLA ATPSRTSNGG PIVKKPAMSE NVSCVLTMAH SIRNSKKTDD VKTSQLVLFG  540
QPILTEQQIS LSCSGDTVSP VLTGNSSSEG NLDKMAKFSD GSGSALHQQG LPERTFCEGL  600
PWYKDMRQEA EPNLETGHCK IFMESEDVGR TLDLSLLESY SELLKKLADM FGIENSETLS  660
HLLYRDATGA VKQIGDEPIS DFKKTARRLT ILMDSSSDNV GGCRGRNKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein