PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022767427.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 300aa    MW: 32966.6 Da    PI: 9.2871
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022767427.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.73.2e-143983147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
   XP_022767427.1 39 RESWTEEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 83
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MESSSSPNPP APPPPQSSTT AADGSGKKVR KPYTITKSRE SWTEEEHDKF LEALQLFDRD  60
WKKIEDFVGS KTVIQIRSHA QKYFLKVQKN GTIAHVPPPR PKRKASHPYP QKATRNVLVP  120
LQASMAYPSS INAIALGFAP WDEASMLINT ASSKIMPPQD EFTSLRGAEA DIGSKGVARI  180
SNSGVSSIGN SSRTISSSDM PKQAKQAPMI HGIPDFAEVY NFIGSVFDPD TKGHIQKLKE  240
MDPINFETVL LLMRNLTVNL CSPDFEPIRK VLSSYDVSST NMVGVTTGII PHNQMNDILC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-135MYB_related family protein