PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022767540.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 557aa MW: 61356 Da PI: 8.304

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022767540.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	6.8e-17	59	105	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde l +av+ + g++Wk+Ia+ ++ R++ qc +rwqk+l XP_022767540.1 59 KGGWTPEEDETLRNAVAAFKGKSWKKIAEFFP-DRSEVQCLHRWQKVL 105 688***************************.**********986 PP
2	Myb_DNA-binding	61.1	2.3e-19	111	157	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++++++v ++G+ W+ Ia+ ++ gR +kqc++rw+++l XP_022767540.1 111 KGPWTQEEDDKIIELVSKYGPTKWSVIAKSLP-GRIGKQCRERWHNHL 157 79****************************.***********97 PP
3	Myb_DNA-binding	50.5	4.6e-16	163	206	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT eE++ l da++ +G++ W+ Ia+ + gRt++ +k++w++ XP_022767540.1 163 KDAWTLEEELALMDAHRIYGNK-WAEIAKVLL-GRTDNAIKNHWNS 206 679*****************.****9.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MIDLKIEECC LENKQLTTAS SSSVSEGGGS AVVKSPGISS PAPTSPNQRR TTGPIRRAKG 60 GWTPEEDETL RNAVAAFKGK SWKKIAEFFP DRSEVQCLHR WQKVLNPDLV KGPWTQEEDD 120 KIIELVSKYG PTKWSVIAKS LPGRIGKQCR ERWHNHLNPH IKKDAWTLEE ELALMDAHRI 180 YGNKWAEIAK VLLGRTDNAI KNHWNSSLKK KLDFYLATGM LPPVVKNGLQ NGTKDINITV 240 TTRNLIVCSK KESDSTAQTS SGTTDICKPE EDGKDRLEFS APVQDMATSS RVIPNDSADT 300 ETAECKPWPS DGSPCCCNSE SGMNFESCRV SSAIVEDKVV EKQVRCGTST SGSLCYEPPR 360 LQGGTSLDSD NLNKKGMQHE CTSTPITSPI SFFTPPSVKG SGLSAHSPES ILRIAAKSFP 420 NTPSIFRKRK TGAQSLTLPN RIGKINEETV KDRIQLSGEQ ERTENSLEQA QFRDGSSVEN 480 PACRGNGSIG PNCTAFNASP PYRLRSKRTA VFKSVERQLE FIFDKERHED NSKSSDVSVN 540 GSSHIEDCLH ATKMGVR

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MIDLKIEECC LENKQLTTAS SSSVSEGGGS AVVKSPGISS PAPTSPNQRR TTGPIRRAKG  60
GWTPEEDETL RNAVAAFKGK SWKKIAEFFP DRSEVQCLHR WQKVLNPDLV KGPWTQEEDD  120
KIIELVSKYG PTKWSVIAKS LPGRIGKQCR ERWHNHLNPH IKKDAWTLEE ELALMDAHRI  180
YGNKWAEIAK VLLGRTDNAI KNHWNSSLKK KLDFYLATGM LPPVVKNGLQ NGTKDINITV  240
TTRNLIVCSK KESDSTAQTS SGTTDICKPE EDGKDRLEFS APVQDMATSS RVIPNDSADT  300
ETAECKPWPS DGSPCCCNSE SGMNFESCRV SSAIVEDKVV EKQVRCGTST SGSLCYEPPR  360
LQGGTSLDSD NLNKKGMQHE CTSTPITSPI SFFTPPSVKG SGLSAHSPES ILRIAAKSFP  420
NTPSIFRKRK TGAQSLTLPN RIGKINEETV KDRIQLSGEQ ERTENSLEQA QFRDGSSVEN  480
PACRGNGSIG PNCTAFNASP PYRLRSKRTA VFKSVERQLE FIFDKERHED NSKSSDVSVN  540
GSSHIEDCLH ATKMGVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-161	MYB family protein