PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022767543.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 477aa MW: 52903.4 Da PI: 7.9244

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022767543.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.4	1.9e-19	31	77	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++++++v ++G+ W+ Ia+ ++ gR +kqc++rw+++l XP_022767543.1 31 KGPWTQEEDDKIIELVSKYGPTKWSVIAKSLP-GRIGKQCRERWHNHL 77 79****************************.***********97 PP
2	Myb_DNA-binding	50.8	3.8e-16	83	126	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT eE++ l da++ +G++ W+ Ia+ + gRt++ +k++w++ XP_022767543.1 83 KDAWTLEEELALMDAHRIYGNK-WAEIAKVLL-GRTDNAIKNHWNS 126 679*****************.****9.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MDTRGAEFFP DRSEVQCLHR WQKVLNPDLV KGPWTQEEDD KIIELVSKYG PTKWSVIAKS 60 LPGRIGKQCR ERWHNHLNPH IKKDAWTLEE ELALMDAHRI YGNKWAEIAK VLLGRTDNAI 120 KNHWNSSLKK KLDFYLATGM LPPVVKNGLQ NGTKDINITV TTRNLIVCSK KESDSTAQTS 180 SGTTDICKPE EDGKDRLEFS APVQDMATSS RVIPNDSADT ETAECKPWPS DGSPCCCNSE 240 SGMNFESCRV SSAIVEDKVV EKQVRCGTST SGSLCYEPPR LQGGTSLDSD NLNKKGMQHE 300 CTSTPITSPI SFFTPPSVKG SGLSAHSPES ILRIAAKSFP NTPSIFRKRK TGAQSLTLPN 360 RIGKINEETV KDRIQLSGEQ ERTENSLEQA QFRDGSSVEN PACRGNGSIG PNCTAFNASP 420 PYRLRSKRTA VFKSVERQLE FIFDKERHED NSKSSDVSVN GSSHIEDCLH ATKMGVR

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MDTRGAEFFP DRSEVQCLHR WQKVLNPDLV KGPWTQEEDD KIIELVSKYG PTKWSVIAKS  60
LPGRIGKQCR ERWHNHLNPH IKKDAWTLEE ELALMDAHRI YGNKWAEIAK VLLGRTDNAI  120
KNHWNSSLKK KLDFYLATGM LPPVVKNGLQ NGTKDINITV TTRNLIVCSK KESDSTAQTS  180
SGTTDICKPE EDGKDRLEFS APVQDMATSS RVIPNDSADT ETAECKPWPS DGSPCCCNSE  240
SGMNFESCRV SSAIVEDKVV EKQVRCGTST SGSLCYEPPR LQGGTSLDSD NLNKKGMQHE  300
CTSTPITSPI SFFTPPSVKG SGLSAHSPES ILRIAAKSFP NTPSIFRKRK TGAQSLTLPN  360
RIGKINEETV KDRIQLSGEQ ERTENSLEQA QFRDGSSVEN PACRGNGSIG PNCTAFNASP  420
PYRLRSKRTA VFKSVERQLE FIFDKERHED NSKSSDVSVN GSSHIEDCLH ATKMGVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-130	MYB family protein