PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022767803.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ERF

Protein Properties

Length: 459aa MW: 52135.6 Da PI: 4.7299

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022767803.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	52.4	1.3e-16	74	132	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng......krkrfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr++ +g+WvAeIr p +ng + +f+lg+ a eAa a+++a+k+++g XP_022767803.1 74 CKFRGVRQRI-WGKWVAEIRQP-INGvrvgsrGNNSFWLGTLSNAIEAALAYDEAAKAMYG 132 79***998.******7.46666665444**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MNRKRKDGVR ASNKNSQARR NGRESVEDTI EKRKQYNNNN NQLQFVEEAG FRNICKVPAK 60 GCMRGKGGPE NSTCKFRGVR QRIWGKWVAE IRQPINGVRV GSRGNNSFWL GTLSNAIEAA 120 LAYDEAAKAM YGPYARLNFP DHSKDSVDNS NKLSVSSATE ACSTDYTSIS YSEDEKGKES 180 NINYASPAEE LKSSELHIVE EAKVCLEDKS MEKHDCSQVY IKEEAGCVAD DNTGTECISR 240 NDCKPYKEHG VEVETLKETM DDELTEVMGI HNFNGIKDTN DYLHNELKDE ECQSTINFMY 300 SDDYNLQTPF KRKEMESEVE LSQIIRSRPS GFNFRYNYLD NADQDAGISV FNLELSNDVK 360 VENLVTRENW KGELAGSIDS IGYNFFFGKD DNRLQTNDSL RSDIYSKPLC EMKAEVPILR 420 KEVEVEPGGF TDFYSHKGFD TNVYDIMPYE PGFELPTTN

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MNRKRKDGVR ASNKNSQARR NGRESVEDTI EKRKQYNNNN NQLQFVEEAG FRNICKVPAK  60
GCMRGKGGPE NSTCKFRGVR QRIWGKWVAE IRQPINGVRV GSRGNNSFWL GTLSNAIEAA  120
LAYDEAAKAM YGPYARLNFP DHSKDSVDNS NKLSVSSATE ACSTDYTSIS YSEDEKGKES  180
NINYASPAEE LKSSELHIVE EAKVCLEDKS MEKHDCSQVY IKEEAGCVAD DNTGTECISR  240
NDCKPYKEHG VEVETLKETM DDELTEVMGI HNFNGIKDTN DYLHNELKDE ECQSTINFMY  300
SDDYNLQTPF KRKEMESEVE LSQIIRSRPS GFNFRYNYLD NADQDAGISV FNLELSNDVK  360
VENLVTRENW KGELAGSIDS IGYNFFFGKD DNRLQTNDSL RSDIYSKPLC EMKAEVPILR  420
KEVEVEPGGF TDFYSHKGFD TNVYDIMPYE PGFELPTTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38340.1	9e-29	ERF family protein