PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022768033.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 510aa    MW: 57252.2 Da    PI: 4.9095
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022768033.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS452.52.6e-1381425103374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     + L++cA  +s+g+ e a+a++++l++l+s +gdp qR+aay++e+Laar+a s++ lykal+++e +   ss++laa+++++ev+P++kf++++
  XP_022768033.1 142 QMLIKCAAILSEGNIEDASAIINELRQLVSIQGDPPQRIAAYMVEGLAARMAASGKYLYKALRCKEPP---SSDRLAAMQILFEVCPCFKFGFMA 233
                     79*****************************************************************9...9*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN aI ea + e+rvHiiDfdi+qG Q+++L+q++a+Rp++pp+lR+Tgv++pes+   +  le +g rL+++Ae+lgvpfef++ va+r++ ++
  XP_022768033.1 234 ANGAIIEACKDEKRVHIIDFDINQGSQYITLIQTIAKRPGKPPHLRLTGVDDPESVqrLNGGLEIVGLRLENLAEALGVPFEFQA-VASRTSLVT 327
                     ******************************************************99777889***********************.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +++L++++gEal+Vn+++qlh+++desvs+ ++rd++L++vksl+Pk+v+vveq++++n+ +Fl rf+ea +yysa+f+sl+++lpres++r++v
  XP_022768033.1 328 PSMLDCRTGEALIVNFAFQLHHMPDESVSTINQRDQLLQMVKSLNPKLVTVVEQDINTNTLPFLPRFIEAYSYYSAVFESLDTTLPRESQDRMNV 422
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     Er++l+r+ivn+vaceg+er+er e ++kWr+r+++aGF++ p+s ++ + ++ l+r++ ++ y+++e+ g l +gW+d++L+++SaWr
  XP_022768033.1 423 ERQCLARDIVNIVACEGEERIERYEVAGKWRARMTMAGFTSCPMSPNVIDMIRKLIREYCDR-YKLKEDLGGLHFGWEDKSLIVASAWR 510
                     ************************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 510 aa     Download sequence    
MSLVSSAEPA SAAYRNTKLY SIQGSSFRPQ DFSSYQLRGT SVFSITGYLE IQSRDTLDSD  60
TDKLKLKLQE LERDLLADND VDEDDDMFFT GLRMEIDGEW SDPIRTEALH ESPKESSTSD  120
SYLSSISSNK KVSHVSSQTP KQMLIKCAAI LSEGNIEDAS AIINELRQLV SIQGDPPQRI  180
AAYMVEGLAA RMAASGKYLY KALRCKEPPS SDRLAAMQIL FEVCPCFKFG FMAANGAIIE  240
ACKDEKRVHI IDFDINQGSQ YITLIQTIAK RPGKPPHLRL TGVDDPESVQ RLNGGLEIVG  300
LRLENLAEAL GVPFEFQAVA SRTSLVTPSM LDCRTGEALI VNFAFQLHHM PDESVSTINQ  360
RDQLLQMVKS LNPKLVTVVE QDINTNTLPF LPRFIEAYSY YSAVFESLDT TLPRESQDRM  420
NVERQCLARD IVNIVACEGE ERIERYEVAG KWRARMTMAG FTSCPMSPNV IDMIRKLIRE  480
YCDRYKLKED LGGLHFGWED KSLIVASAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein