PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022768034.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 502aa    MW: 56459.3 Da    PI: 4.9095
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022768034.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS452.62.5e-1381345023374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     + L++cA  +s+g+ e a+a++++l++l+s +gdp qR+aay++e+Laar+a s++ lykal+++e +   ss++laa+++++ev+P++kf++++
  XP_022768034.1 134 QMLIKCAAILSEGNIEDASAIINELRQLVSIQGDPPQRIAAYMVEGLAARMAASGKYLYKALRCKEPP---SSDRLAAMQILFEVCPCFKFGFMA 225
                     79*****************************************************************9...9*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN aI ea + e+rvHiiDfdi+qG Q+++L+q++a+Rp++pp+lR+Tgv++pes+   +  le +g rL+++Ae+lgvpfef++ va+r++ ++
  XP_022768034.1 226 ANGAIIEACKDEKRVHIIDFDINQGSQYITLIQTIAKRPGKPPHLRLTGVDDPESVqrLNGGLEIVGLRLENLAEALGVPFEFQA-VASRTSLVT 319
                     ******************************************************99777889***********************.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +++L++++gEal+Vn+++qlh+++desvs+ ++rd++L++vksl+Pk+v+vveq++++n+ +Fl rf+ea +yysa+f+sl+++lpres++r++v
  XP_022768034.1 320 PSMLDCRTGEALIVNFAFQLHHMPDESVSTINQRDQLLQMVKSLNPKLVTVVEQDINTNTLPFLPRFIEAYSYYSAVFESLDTTLPRESQDRMNV 414
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     Er++l+r+ivn+vaceg+er+er e ++kWr+r+++aGF++ p+s ++ + ++ l+r++ ++ y+++e+ g l +gW+d++L+++SaWr
  XP_022768034.1 415 ERQCLARDIVNIVACEGEERIERYEVAGKWRARMTMAGFTSCPMSPNVIDMIRKLIREYCDR-YKLKEDLGGLHFGWEDKSLIVASAWR 502
                     ************************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 502 aa     Download sequence    
MSLVSSAEPA SAAYRNTKLY SIQGSSFRPQ DFSSYQLRGY LEIQSRDTLD SDTDKLKLKL  60
QELERDLLAD NDVDEDDDMF FTGLRMEIDG EWSDPIRTEA LHESPKESST SDSYLSSISS  120
NKKVSHVSSQ TPKQMLIKCA AILSEGNIED ASAIINELRQ LVSIQGDPPQ RIAAYMVEGL  180
AARMAASGKY LYKALRCKEP PSSDRLAAMQ ILFEVCPCFK FGFMAANGAI IEACKDEKRV  240
HIIDFDINQG SQYITLIQTI AKRPGKPPHL RLTGVDDPES VQRLNGGLEI VGLRLENLAE  300
ALGVPFEFQA VASRTSLVTP SMLDCRTGEA LIVNFAFQLH HMPDESVSTI NQRDQLLQMV  360
KSLNPKLVTV VEQDINTNTL PFLPRFIEAY SYYSAVFESL DTTLPRESQD RMNVERQCLA  420
RDIVNIVACE GEERIERYEV AGKWRARMTM AGFTSCPMSP NVIDMIRKLI REYCDRYKLK  480
EDLGGLHFGW EDKSLIVASA WR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein