PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022768443.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 226aa    MW: 25318.1 Da    PI: 7.3907
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022768443.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.86.1e-28959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n + rqvtfskRr g++KKAeELSvLCdaeva+iifs tgkl+e++s
  XP_022768443.1  9 KKIDNVTARQVTFSKRRRGVFKKAEELSVLCDAEVALIIFSATGKLFEFAS 59
                    68***********************************************86 PP
2K-box48.15.1e-17861701498
           K-box  14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                      +  + ++ +L kei    +++R++ GedL+ L++ eLqqLe+ Le++l+++ ++K e ++++i+ l kk  +l eenk+L++k+
  XP_022768443.1  86 LQLENSNHIRLSKEIADKTHQLRQMRGEDLQGLNIDELQQLEKMLESGLTRVLETKGERIINEISSLEKKGAQLLEENKQLKQKM 170
                     55566677899999999999***************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MAREKIKIKK IDNVTARQVT FSKRRRGVFK KAEELSVLCD AEVALIIFSA TGKLFEFASS  60
SMKDILGRYN LHSNNLNKLE QPSLELQLEN SNHIRLSKEI ADKTHQLRQM RGEDLQGLNI  120
DELQQLEKML ESGLTRVLET KGERIINEIS SLEKKGAQLL EENKQLKQKM VTLCKGKRPV  180
LADLDVAVQE EGMSSESVTN VCSCSSGPPL EDDSSDTSLK LGLPFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-105MIKC_MADS family protein