PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022768465.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 653aa MW: 69349.5 Da PI: 5.2304

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022768465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.3	3.5e-08	204	250	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqk 46 r++W++ Ed l+ av++ G g+W+ I r R++ q+ rw + XP_022768465.1 204 RKPWSEAEDMELIAAVQKCGVGNWANILRGNFkGERSASQLAQRWTT 250 789*************************9776679999999999976 PP

Sequence ? help Back to Top
Protein Sequence Length: 653 aa Download sequence
MIDKTNKQIK GSISEEDIST LLQRYTATTI LTLLQEVAQF PGVKLNWNAL VKKTSTGISN 60 AREYQMLWRQ LAYRDALLEK LEDGAEPLDD DSDLEYELEP CPSVSSEASA EAAACVKVLI 120 ASGLPNDSSL ASNSTVEAPL TINIPNERSF RVSSENSQPT CSMQGMNITV PVSVQKKILP 180 AVTSVETLEG NGSAGAKPPA RRKRKPWSEA EDMELIAAVQ KCGVGNWANI LRGNFKGERS 240 ASQLAQRWTT IKKRLGNLNV EGNSTIHQLS EAQLATRSAL SLALDMPDKT LTAACTNNPG 300 LKITSSNSAL PTISGEATVQ AQSQFQQGPT ASVQAPNRSQ QGPITSASSH NQPQKGPIPS 360 VPAQNPSQHG PVASVQVPNQ SQQCPMTTNA SPRGSSSSTL KSRVTSKKPL AKSFSATGSI 420 LDATAVKPLI PGGTSSHLEV RSNVQYVCTG QTAEPLSSPI VTSSTLHPGS VKSAAQRVEH 480 TPSASSSSLN VSIQQSNAVT SSPTTEGPPK EELEAAIVIK SSVSDSLSKE QVKENGACVS 540 KNEPGELVIE HKEAVLNPEY VLKNLEAVAE YPNEKLMSEG DQVDVKANLV EESENTGDKK 600 IDCSLVKKSD SQPTAEESWR NQSMIETPAE ASLNDGCTMN LAVLSTAETG QAT

Sequence ? help Back to Top

Protein Sequence Length: 653 aa Download sequence

MIDKTNKQIK GSISEEDIST LLQRYTATTI LTLLQEVAQF PGVKLNWNAL VKKTSTGISN  60
AREYQMLWRQ LAYRDALLEK LEDGAEPLDD DSDLEYELEP CPSVSSEASA EAAACVKVLI  120
ASGLPNDSSL ASNSTVEAPL TINIPNERSF RVSSENSQPT CSMQGMNITV PVSVQKKILP  180
AVTSVETLEG NGSAGAKPPA RRKRKPWSEA EDMELIAAVQ KCGVGNWANI LRGNFKGERS  240
ASQLAQRWTT IKKRLGNLNV EGNSTIHQLS EAQLATRSAL SLALDMPDKT LTAACTNNPG  300
LKITSSNSAL PTISGEATVQ AQSQFQQGPT ASVQAPNRSQ QGPITSASSH NQPQKGPIPS  360
VPAQNPSQHG PVASVQVPNQ SQQCPMTTNA SPRGSSSSTL KSRVTSKKPL AKSFSATGSI  420
LDATAVKPLI PGGTSSHLEV RSNVQYVCTG QTAEPLSSPI VTSSTLHPGS VKSAAQRVEH  480
TPSASSSSLN VSIQQSNAVT SSPTTEGPPK EELEAAIVIK SSVSDSLSKE QVKENGACVS  540
KNEPGELVIE HKEAVLNPEY VLKNLEAVAE YPNEKLMSEG DQVDVKANLV EESENTGDKK  600
IDCSLVKKSD SQPTAEESWR NQSMIETPAE ASLNDGCTMN LAVLSTAETG QAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	5e-67	MYB_related family protein