PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022768506.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 90aa    MW: 10141.6 Da    PI: 10.6551
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022768506.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.54e-291059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    ri+n++nrqvtfskRrng+lKKA+EL +LCdaev v+ifsstgkly++ss
  XP_022768506.1 10 RIDNSTNRQVTFSKRRNGLLKKAKELAILCDAEVGVMIFSSTGKLYDFSS 59
                    8***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MGRGKIVIRR IDNSTNRQVT FSKRRNGLLK KAKELAILCD AEVGVMIFSS TGKLYDFSSN  60
SMRSVIERYN KTEEHQLGNP TSEVKVFSGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.12e-46MIKC_MADS family protein