PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022768973.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 491aa MW: 51382.8 Da PI: 9.323

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022768973.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.4	2.6e-05	69	91	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022768973.1 69 FVCEICKKGFQRDQNLQLHRRGH 91 89*******************88 PP
2	zf-C2H2	15.8	4e-05	145	167	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k + +s+ k H++t+ XP_022768973.1 145 WKCERCSKKYAVQSDWKAHMKTC 167 58*******************98 PP
3	zf-C2H2	11.5	0.00094	175	193	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg+ Fsr+++L +H + XP_022768973.1 175 DCGTIFSRRDSLITHRAFC 193 8**************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MVELENSSPM AVSRVSGEAS ASSSGHQIQG TQQTGEGTPK KKRNLPGMPD PDAEVMALSP 60 KTLLATNRFV CEICKKGFQR DQNLQLHRRG HNLPWKLRQR TSKEIRKRVY VCPEPSCVHH 120 NPARALGDLT GIKKHFCRKH GEKKWKCERC SKKYAVQSDW KAHMKTCGTR EYKCDCGTIF 180 SRRDSLITHR AFCDALAEES ARAQTLEMAD TEGNGSGKSM VGSGAASTSP PPQPLTPSTT 240 SVVSPGLSIQ SSEIPENPMG LSPPTPAATS TSPSNSNVFA SVFAPNSQPS KIPAPSSILQ 300 SGAPLERTSL SLSSRLYLSN NGSSIFSGPE HDHCHYAPSP QPAMSATALL QKAARMGSAA 360 SNPSLLRGLG LAISSTSSDG KDPNVKSESN SMATGFGLGL PTNGSSGLTN TMIGISSSSL 420 FGNKPTTLDL LGLGMGDGGA SSSGLSALLT SFGGGFNVGA AATTSYGTGG SSPGETWEGA 480 PDRKPTGPTM L

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MVELENSSPM AVSRVSGEAS ASSSGHQIQG TQQTGEGTPK KKRNLPGMPD PDAEVMALSP  60
KTLLATNRFV CEICKKGFQR DQNLQLHRRG HNLPWKLRQR TSKEIRKRVY VCPEPSCVHH  120
NPARALGDLT GIKKHFCRKH GEKKWKCERC SKKYAVQSDW KAHMKTCGTR EYKCDCGTIF  180
SRRDSLITHR AFCDALAEES ARAQTLEMAD TEGNGSGKSM VGSGAASTSP PPQPLTPSTT  240
SVVSPGLSIQ SSEIPENPMG LSPPTPAATS TSPSNSNVFA SVFAPNSQPS KIPAPSSILQ  300
SGAPLERTSL SLSSRLYLSN NGSSIFSGPE HDHCHYAPSP QPAMSATALL QKAARMGSAA  360
SNPSLLRGLG LAISSTSSDG KDPNVKSESN SMATGFGLGL PTNGSSGLTN TMIGISSSSL  420
FGNKPTTLDL LGLGMGDGGA SSSGLSALLT SFGGGFNVGA AATTSYGTGG SSPGETWEGA  480
PDRKPTGPTM L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-111	C2H2 family protein