PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022769144.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 947aa    MW: 104320 Da    PI: 5.0409
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022769144.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.82.4e-24149250199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        ++++ + ++l+++d++ ++W++++iyr++++r++lt+GW+ Fv +++L++gD+v+F   +++
  XP_022769144.1 149 FCKTLTASDTSTHGGFSVPRRAAEKLfppldytMQPP-T-QELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFI--RDE 239
                     99*********************999*****954444.4.38************************************************..457 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+v+v+r+
  XP_022769144.1 240 KSQLLVGVRRA 250
                     7778*****97 PP
2Auxin_resp114.59.5e-38275358183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+++s+F+++YnPra++seFv+++ +++k+++ ++vsvGmRf m+fete+s +rr++Gt+vg+sdldp+rWp+SkWr+L+
  XP_022769144.1 275 AAHAAANRSPFTIFYNPRACPSEFVIPLPRYRKSVYgSQVSVGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNLQ 358
                     79**********************************99********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 947 aa     Download sequence    
MGSVVEEKIK TGALVNGGAQ ATLLEEMKLL KEMQDQSGTR KAINSELWHA CAGPLVFLPQ  60
VGSLVYYFPQ GHSEQVAVST KRMATSQIPS YPNLPSQLMC QVHNVTLHAD KDTDEIYAQM  120
SLQPVNTEKD VFPIPDFGLK PSKHPNEFFC KTLTASDTST HGGFSVPRRA AEKLFPPLDY  180
TMQPPTQELV VRDLHDNTWT FRHIYRGQPK RHLLTTGWSL FVGSKRLRAG DSVLFIRDEK  240
SQLLVGVRRA NRQQTTLPSS VLSADSMHIG VLAAAAHAAA NRSPFTIFYN PRACPSEFVI  300
PLPRYRKSVY GSQVSVGMRF GMMFETEESG KRRYMGTIVG ISDLDPLRWP GSKWRNLQVE  360
WDEPGCNDKQ NRVSAWEIET PESLFIFPSL TSGLKRPFHT GILESEWGSL IKRPLLQFPE  420
NGNGSLPYSI SNLCSEQLMK MMLKPQLVSH PGIFASTLQQ ISAAKGSPLE EMKNMQSTSN  480
QKPQPIQSEN LLIESQNLSQ LVPDQPDPIN SNLPKINANG NLHPANKLES QTQARSNDEK  540
LKLDSEHSTD QLSQMTSISE CNEEKLEANA VSPSSILNQL SFSNQSQMPF QLQNNPWPIQ  600
SQLESSVLQA HQIQLSQADI SNLSSFLPFI DANEWTPHLS SCQPLAGIYK SPGPTLAVGL  660
QDSSAVLPEA TNSSLTTGGQ DTWDHQLNNC RVLYQADQLT SFTQQDPCSL NSGGLRDLSD  720
DSNNQSGIYS CLNIDVSNGG STVIDPSVSS VILDELCSLK DADFQNPSDC LVGNFSSSQD  780
VQSQITSASL ADSQAFSRQD LPDSSGGTSS SNIDFDESGL LQNNSWHQMA PRVRTYTKVQ  840
KAGSVGRSID VTSFKNYGEL ISAIESMFGL KGLLDDPRGS GWKLVYVDYE NDVLLVGDDP  900
WDEFVGCVRC IRILSPTEVQ QMSEEGMKLL NSATMQGING FDSGCNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.10.0ARF family protein