PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022769483.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 243aa MW: 27526.3 Da PI: 8.768

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022769483.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.8	1e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_022769483.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP
2	K-box	98.9	7.4e-33	80	173	7	100
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +s + ++++s +qe+ kLk+++e Lqr+qR+llGedL++L+ keL+qLe+qLe+slk+iR++K++ +l+q+ +lq++e++l e+nk+L +klee XP_022769483.1 80 NSRSISETQSNYQEYLKLKARVEVLQRSQRNLLGEDLGPLDSKELEQLENQLETSLKQIRTTKTQAMLDQLGDLQNREQMLVEANKSLGRKLEE 173 45677899***********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS 60 SSMMKTLEKY QKCSFNAPDN SRSISETQSN YQEYLKLKAR VEVLQRSQRN LLGEDLGPLD 120 SKELEQLENQ LETSLKQIRT TKTQAMLDQL GDLQNREQML VEANKSLGRK LEELSAQVPL 180 RLAWEIGGTN APYNQLPAQS EGFFQPLGGN SSLQIGYNPV VSDEMNVVGH NQNVSGFFPG 240 WML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15800.1	1e-105	MIKC_MADS family protein