PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022769501.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 187aa    MW: 21906.4 Da    PI: 10.4973
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022769501.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF100.85.1e-32958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gklye+ 
  XP_022769501.1  9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 58
                    79**********************************************95 PP
2K-box97.61.8e-32811681097
           K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                      e+++++++qe++kLk +++ Lqr+qRhllGedL++L++keLq+Le+qLe +l   R++K+++++eq+e+l+kke+ l + nk+L+ k
  XP_022769501.1  81 LERETQNWYQEVTKLKTKYQALQRTQRHLLGEDLGPLNVKELQNLEKQLEGALALARQRKTQIMIEQMEDLRKKERHLGDLNKQLKIK 168
                     56789********************************************************************************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLYEFGSS  60
GMTKTLERYQ RCCLTPQDNS LERETQNWYQ EVTKLKTKYQ ALQRTQRHLL GEDLGPLNVK  120
ELQNLEKQLE GALALARQRK TQIMIEQMED LRKKERHLGD LNKQLKIKKD RTSKQSKALE  180
FCCSSRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.14e-88MIKC_MADS family protein