PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022769540.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 518aa    MW: 58001 Da    PI: 6.1155
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022769540.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3473e-1061585131374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                     l++lLlecA a+s ++l +a+++L +l ++asp++ +  +R++ayf++ +++r+ +s+ ++++ l   ++       +  a+++f++vsP++kf+
  XP_022769540.1 158 LITLLLECAVAISVDNLGEAHRMLLELTQMASPYAlSCAERVVAYFAKSMSSRVINSWLGICSPLINYKS-------VHCAFQAFNNVSPFIKFA 245
                     5789*******************************999***********************986644443.......457899************ PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     h+t NqaIlea+++ +rvHiiD+di+qGlQWpaL++ La+R egpp +R+Tg+gs    s e l etg++L++fA++lg++fef++ +ak++ ++
  XP_022769540.1 246 HFTSNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRIEGPPYVRMTGMGS----SMELLVETGKQLSNFAKRLGMSFEFHP-IAKKFGEI 335
                     *******************************************************....***************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     e+ +  v++gE+la+++    h+l+d +++  +    +L+l+ +l P v+++veq+++h ++sFl+rf+ +l+yys++fdsl a lp+++  r+ 
  XP_022769540.1 336 EITMVPVRRGETLAIHWLQ--HSLYDATGPDWK----ILRLFEQLAPSVITLVEQDLSH-GGSFLDRFVGSLHYYSTMFDSLGAYLPADDPSRHH 423
                     ******************9..999999999888....**********************.789******************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +E+ ll++ei n++a  g +r  +  ++++Wr+ l +  F +vp+s++ ++qa+l+l++++  +gy++ + +g+l lgWkd +L+++SaW+
  XP_022769540.1 424 IEHCLLHKEINNILAIGGPARSGED-KFKHWRNELARNCFLQVPMSNNSMAQAQLILNMFPpAHGYSLVQGDGTLRLGWKDTSLFTASAWT 513
                     ********************77665.5***************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    
MMKGGFEVVH ATLDMIQPHH EPIWDLASFG FPTTSTVSSI PRQTVENRCI NLERNELSEW  60
VEQITKQLID DLPAETGTRD HTSLEAADTS MVCEDNFAPS VLGDFRPRKT VRRSVLDGSC  120
GQELQWGNEL GNQTDNVCEN GGNDRGLSRL DDEQGLSLIT LLLECAVAIS VDNLGEAHRM  180
LLELTQMASP YALSCAERVV AYFAKSMSSR VINSWLGICS PLINYKSVHC AFQAFNNVSP  240
FIKFAHFTSN QAILEAFHRR DRVHIIDLDI MQGLQWPALF HILATRIEGP PYVRMTGMGS  300
SMELLVETGK QLSNFAKRLG MSFEFHPIAK KFGEIEITMV PVRRGETLAI HWLQHSLYDA  360
TGPDWKILRL FEQLAPSVIT LVEQDLSHGG SFLDRFVGSL HYYSTMFDSL GAYLPADDPS  420
RHHIEHCLLH KEINNILAIG GPARSGEDKF KHWRNELARN CFLQVPMSNN SMAQAQLILN  480
MFPPAHGYSL VQGDGTLRLG WKDTSLFTAS AWTSHAST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.11e-142GRAS family protein