PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022769560.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WRKY

Protein Properties

Length: 1039aa MW: 118413 Da PI: 8.3478

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022769560.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	85	6.9e-27	712	769	1	58
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 ldD y+WrKYGqK+vkg+++pr YY+C ++gCpv+k ver+ +d++++++tYeg Hnh XP_022769560.1 712 LDDCYRWRKYGQKTVKGNPYPRCYYKCLTSGCPVRKSVERDYQDKSFLITTYEGVHNH 769 58******************************************************** PP
2	WRKY	56.9	4.1e-18	845	900	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 D y+Wr YG K +g++ rsYYrC+++gCp+ k vers ++++++++ + Hnh+ XP_022769560.1 845 ADAYTWRCYGIKGLTGNR-RRSYYRCAYPGCPANKSVERSL-EGQITQVIHKAWHNHP 900 69************97.6*****************.*************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1039 aa Download sequence
MQQSVPKASG SALTELLKEE KWAAKEIHLT DDKHKVSDLP KSPNCSSLIA LYLQGNYELT 60 AIPPLFFQRM ALLQVLDLSH TSIKSLPKSL PKLVSLKKLL LRNCELFMEL SPQVGKLKNL 120 EDLDLDETEI MDLPSQIGKL VKLRNLRVSF YHICGKKKSK SNILIHPETI SILSQLAKLS 180 IDVNPADKRW DDSVEAVVKE VCNSKTLKTL SLHLPKFQLL DNISLIYPSL SHFRFTVGHH 240 KRRIISRVPH EVEAEYRSWD KCLKFVNGEN IPIEIKGILK YSSSFFLDHH ETAMNLSEFG 300 IKNMKRLKFC LLTECNKMET LIDGEMHDER NEDDQSESDP DSIEHVLESL ECLSIYYMEN 360 LWSIWRGPNH YGCMSNLKFL ALHACPQLRN IFSLTLLENF VKLEEIIVED CPQVTSLVSR 420 PSVKPMMSDK FLPSLKRLLL LYLPGLVSIS NGLLIAPKLE SIGFYNCPKL KSISKMELSS 480 KTLMIIKGEC QWWEDLKWNE REWGNRPDYL MRIFSPISNE KDVMTQLTED RDLLEATKQN 540 EVQQQDDEKL LKVSTEDHKG QCSDYKEERI RGTDVTKSPS SCILPSNPLT GTDVTKSPLA 600 CILPSDSWTG TDSTNFPSPC ILPSNPLRTS DAPKQALSLF SSEKNKRLED GYFDLASEIC 660 EVDVDEDEPK AKRSNCTENE NKGLIGSASK TMRGHRVAFR TRTRTRSSSA VLDDCYRWRK 720 YGQKTVKGNP YPRCYYKCLT SGCPVRKSVE RDYQDKSFLI TTYEGVHNHC CYDRGLYHLH 780 IRRLCNDHRA NQMEDAGDSA KIIGPTKGYG DVFEASIQDK GAHPGFLEAS IRDESQQSVK 840 SRKSADAYTW RCYGIKGLTG NRRRSYYRCA YPGCPANKSV ERSLEGQITQ VIHKAWHNHP 900 ESQPTRTSSL SAFSHIIRAS NHLTIKIPDQ SFVTYEGGHM DAEAGSVVFM RSLMDKKFDQ 960 PSDRPKADID EDVPKAQKRF RKCSKASVVT VTVGANNFRE MVQSMTGMPA KELQEERKLT 1020 ARKRCVIEVQ RKKKTECNR

Sequence ? help Back to Top

Protein Sequence Length: 1039 aa Download sequence

MQQSVPKASG SALTELLKEE KWAAKEIHLT DDKHKVSDLP KSPNCSSLIA LYLQGNYELT  60
AIPPLFFQRM ALLQVLDLSH TSIKSLPKSL PKLVSLKKLL LRNCELFMEL SPQVGKLKNL  120
EDLDLDETEI MDLPSQIGKL VKLRNLRVSF YHICGKKKSK SNILIHPETI SILSQLAKLS  180
IDVNPADKRW DDSVEAVVKE VCNSKTLKTL SLHLPKFQLL DNISLIYPSL SHFRFTVGHH  240
KRRIISRVPH EVEAEYRSWD KCLKFVNGEN IPIEIKGILK YSSSFFLDHH ETAMNLSEFG  300
IKNMKRLKFC LLTECNKMET LIDGEMHDER NEDDQSESDP DSIEHVLESL ECLSIYYMEN  360
LWSIWRGPNH YGCMSNLKFL ALHACPQLRN IFSLTLLENF VKLEEIIVED CPQVTSLVSR  420
PSVKPMMSDK FLPSLKRLLL LYLPGLVSIS NGLLIAPKLE SIGFYNCPKL KSISKMELSS  480
KTLMIIKGEC QWWEDLKWNE REWGNRPDYL MRIFSPISNE KDVMTQLTED RDLLEATKQN  540
EVQQQDDEKL LKVSTEDHKG QCSDYKEERI RGTDVTKSPS SCILPSNPLT GTDVTKSPLA  600
CILPSDSWTG TDSTNFPSPC ILPSNPLRTS DAPKQALSLF SSEKNKRLED GYFDLASEIC  660
EVDVDEDEPK AKRSNCTENE NKGLIGSASK TMRGHRVAFR TRTRTRSSSA VLDDCYRWRK  720
YGQKTVKGNP YPRCYYKCLT SGCPVRKSVE RDYQDKSFLI TTYEGVHNHC CYDRGLYHLH  780
IRRLCNDHRA NQMEDAGDSA KIIGPTKGYG DVFEASIQDK GAHPGFLEAS IRDESQQSVK  840
SRKSADAYTW RCYGIKGLTG NRRRSYYRCA YPGCPANKSV ERSLEGQITQ VIHKAWHNHP  900
ESQPTRTSSL SAFSHIIRAS NHLTIKIPDQ SFVTYEGGHM DAEAGSVVFM RSLMDKKFDQ  960
PSDRPKADID EDVPKAQKRF RKCSKASVVT VTVGANNFRE MVQSMTGMPA KELQEERKLT  1020
ARKRCVIEVQ RKKKTECNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	2e-25	WRKY family protein