PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022769580.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 259aa MW: 29541 Da PI: 9.2846

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022769580.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.2	4.6e-19	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll ++v+ +G g+W++ ar g++R++k+c++rw +yl XP_022769580.1 16 KGPWTPEEDKLLTEYVNFHGEGRWSSLARSAGLNRSGKSCRLRWVNYL 63 79********************************************97 PP
2	Myb_DNA-binding	49	1.4e-15	69	113	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr T++E+ ++ ++++++G++ W+tIa +++ gRt++++k++w+++ XP_022769580.1 69 RGRITPQEEGIIFKLHALWGNK-WSTIAGYLP-GRTDNEIKNYWRTH 113 899*****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
MVRMTGWEAP KQGWRKGPWT PEEDKLLTEY VNFHGEGRWS SLARSAGLNR SGKSCRLRWV 60 NYLRPGLKRG RITPQEEGII FKLHALWGNK WSTIAGYLPG RTDNEIKNYW RTHFKNKERS 120 SQKQEQRKAQ ILKLKQQQQQ QQQDGEPQQD KDQTAAVGDG KHINSQVTDE AQGKQETVFM 180 HLTSEDQRLP VISQEAAASW LDRYLVDEGC LWGGGLWNLD DPYQPGNCNK IFAMQNQATA 240 YNSVGGDAIN VYNGGGHII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30210.1	3e-70	MYB family protein