PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022769643.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 301aa    MW: 34107.4 Da    PI: 7.2041
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022769643.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.15.6e-152269148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEde+l ++    G g+W+ Iar  g+ R++k+c++rw +yl
   XP_022769643.1 22 KGLWSPEEDEKLMKYMLTSGQGCWSNIARNAGLQRCGKSCRLRWINYL 69
                     678*******************************************97 PP
2Myb_DNA-binding47.73.5e-1575119147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+++++E+ l+++++  lG++ W+ Ia++++ gRt++++k++w++ 
   XP_022769643.1  75 RGAFSPQEEGLIIHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNST 119
                      89********************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MRKPDPNMGK VRVNNNKIKL RKGLWSPEED EKLMKYMLTS GQGCWSNIAR NAGLQRCGKS  60
CRLRWINYLR PDLKRGAFSP QEEGLIIHLH SILGNRWSQI AARLPGRTDN EIKNFWNSTL  120
KKRLKNNTST SSSPNNSDSS EPRDVVGGIF PVYEHDIMTL CMNSSSSSMV TAGNQFDPFH  180
LLNNRYNMTD APACLTQGGM GDTFYGDYYG ILEPGKIGLE GDFSLSPLES NAAHNSIDMK  240
SNNNHYNNTC FNNTDQSFKV ADMFGLENHH LQGENLRMGE WDLERLMDNI PSFPLLDFQV  300
E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08500.11e-86MYB family protein