PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022769662.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 489aa MW: 52924.3 Da PI: 8.8871

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022769662.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.8	1.3e-15	313	358	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRd+iN+++ +L++l+P++ K +Ka++L +++eY+k+Lq XP_022769662.1 313 HNQSERKRRDKINQRMKTLQKLVPNS-----SKTDKASMLDEVIEYLKQLQ 358 9**********************8.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MGQVPLRQQS LVVLPVSAVK MSRCVPSWDL DDNPATARHS LRSNSNSTTP DVPMLDYEVA 60 ELTWENGQLT MHSLGPPRVP VKLLNSTSSP KYTWDKPRAS GTLESIVNQA TRFPYHKASL 120 NGGGDEIVPW LDHHRAAAAA AASSATKTMD ALVPCSNRSE DRATHVMESI PGLGGTCVVG 180 CSTKLGSCSG AAGTQDDEVI LTGKPALAAR VRVTPEWSRK EQSASASATF GRDGQHVTVD 240 TYEKDLGVGF TSTSLGSPEN TSSAKHCTKA TTADDHDSVC HSRPQREAGE EAKKKETMKS 300 SVSTKRSRAA AIHNQSERKR RDKINQRMKT LQKLVPNSSK TDKASMLDEV IEYLKQLQAQ 360 VQIMSRFNIP PMMLPMTMQQ QLQMSMMAPM GMGMGMRMGM GMGMGFMDMN PMGRPNVSGI 420 SPVLPNPFMT MTSWDGSGDR LQAASAAVMP DPLSAFLACQ SQPMTMDAYS RMAAMYQQMQ 480 QPPASGSKS

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MGQVPLRQQS LVVLPVSAVK MSRCVPSWDL DDNPATARHS LRSNSNSTTP DVPMLDYEVA  60
ELTWENGQLT MHSLGPPRVP VKLLNSTSSP KYTWDKPRAS GTLESIVNQA TRFPYHKASL  120
NGGGDEIVPW LDHHRAAAAA AASSATKTMD ALVPCSNRSE DRATHVMESI PGLGGTCVVG  180
CSTKLGSCSG AAGTQDDEVI LTGKPALAAR VRVTPEWSRK EQSASASATF GRDGQHVTVD  240
TYEKDLGVGF TSTSLGSPEN TSSAKHCTKA TTADDHDSVC HSRPQREAGE EAKKKETMKS  300
SVSTKRSRAA AIHNQSERKR RDKINQRMKT LQKLVPNSSK TDKASMLDEV IEYLKQLQAQ  360
VQIMSRFNIP PMMLPMTMQQ QLQMSMMAPM GMGMGMRMGM GMGMGFMDMN PMGRPNVSGI  420
SPVLPNPFMT MTSWDGSGDR LQAASAAVMP DPLSAFLACQ SQPMTMDAYS RMAAMYQQMQ  480
QPPASGSKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	317	322	ERKRRD
2	318	323	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	1e-112	bHLH family protein