PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022769671.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

YABBY

Protein Properties

Length: 213aa MW: 23444.7 Da PI: 6.9858

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022769671.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	239.8	5.8e-74	11	177	2	170
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee..lleelkveeenlksnvekeesast 94 d+ s s+q+Cyv+CnfC+t+lavsvP tslfk+vtvrCGhCt+llsvn++ a + hl++s+ + llee +++ ++ + + + XP_022769671.1 11 DHLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPAANQLHLGHSFFTPqnLLEEIRTSPP-PNMLINQPNP--N 102 78899***************************************99999998888899999998765345666655443.3333333344..4 PP YABBY 95 svsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++ + ++ +e+p++p v+rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl XP_022769671.1 103 DTVMPAIP-GGIDEIPNPPVVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 177 44444454.45678999999****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MSSSTAAFSP DHLSPSDQLC YVHCNFCDTV LAVSVPCTSL FKTVTVRCGH CTNLLSVNMR 60 GLLLPAANQL HLGHSFFTPQ NLLEEIRTSP PPNMLINQPN PNDTVMPAIP GGIDEIPNPP 120 VVNRPPEKRQ RVPSAYNRFI KDEIQRIKAG NPDISHREAF SAAAKNWAHF PHIHFGLVPD 180 QPVQKTNVCQ QEGEDVLMKD GFFAPANVGV TPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45190.1	1e-101	YABBY family protein