PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022769695.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 227aa    MW: 26140 Da    PI: 9.5182
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022769695.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.11.3e-292271251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rien + rqvtfskRr g+lKKA+ELSvLCdaeva+iifs++gklye++s
  XP_022769695.1 22 RIENATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 71
                    8***********************************************86 PP
2K-box88.21.6e-2990180897
           K-box   8 s.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                        +e+++++l++e+a++ k+ie Lq + R+llGe+L+s++l+eLqq+eqqLe+s++++R++K+++++eqie+l++kek l  en +L +k
  XP_022769695.1  90 TtPTEQNMQHLKTESANMVKKIELLQVSRRKLLGECLGSCTLEELQQIEQQLERSVSRVRARKTQVFKEQIEQLKEKEKVLAAENARLCEK 180
                     237899********************************************************************************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MIASVFLLEG AEMVRGKTQM RRIENATSRQ VTFSKRRSGL LKKAFELSVL CDAEVALIIF  60
SPRGKLYEFA SSSMQETIER YMRHTKDNRT TPTEQNMQHL KTESANMVKK IELLQVSRRK  120
LLGECLGSCT LEELQQIEQQ LERSVSRVRA RKTQVFKEQI EQLKEKEKVL AAENARLCEK  180
CGTQPWKGSN EKKENVPYDE SNPCSNVETE LFIGLPEGRT KRTLQHN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.13e-79MIKC_MADS family protein