PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022769739.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

LBD

Protein Properties

Length: 115aa MW: 13251.2 Da PI: 4.6959

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022769739.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	47.1	6.7e-15	1	54	45	98
DUF260 45 llkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +++ ++e++reda+++l+yeA ar+rdPvyG++g i++lq+ +++lk +l+++k XP_022769739.1 1 MIQMVEETNREDAAEALFYEATARIRDPVYGSTGAIFQLQKIVQELKMQLESTK 54 6889999*******************************************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 115 aa Download sequence
MIQMVEETNR EDAAEALFYE ATARIRDPVY GSTGAIFQLQ KIVQELKMQL ESTKALVLEL 60 QQQKDQLLGI LLNVNHLDHS GSLSLDHDDS MAYHPAKFPV ECNWIFEYPI KCWKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	1e-16	LBD family protein