PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022769742.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 286aa    MW: 32375.5 Da    PI: 8.7731
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022769742.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.45.8e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+ Ed llv++++ +G g+W++ +++ g+ R++k+c++rw +yl
   XP_022769742.1 14 RGPWTPREDTLLVKYIQAHGEGHWRSLPKKAGLLRCGKSCRLRWMNYL 61
                     89******************************99************97 PP
2Myb_DNA-binding52.11.5e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ +++Ed+l+++++ +lG++ W++Ia +++ gRt++++k++w+++l
   XP_022769742.1  67 RGNISPDEDDLIIRLHSLLGNR-WSLIAGRLP-GRTDNEIKNYWNTHL 112
                      7899******************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MGRAPCCSKV GLHRGPWTPR EDTLLVKYIQ AHGEGHWRSL PKKAGLLRCG KSCRLRWMNY  60
LRPDIKRGNI SPDEDDLIIR LHSLLGNRWS LIAGRLPGRT DNEIKNYWNT HLSKRLLSQG  120
TDPDTHKKLS EPVVQEVKNS KKSRGSINKK QNKKSKAKQI VEPAEKPKVH LPKPIRVTSF  180
SLPRNDSFDQ CNTFSTVSST QGGEGGLEVV RVPWSEYINN NENGTGFLSA YDDHDLVNGS  240
DFECHSHVAA NEDDTSLEKL YEEYLQLLKT NEDPAQLDSF AESFLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16720.11e-71MYB family protein