PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022769854.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 232aa    MW: 25482.2 Da    PI: 6.3304
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022769854.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.82e-3971071100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+++Cv+apyf++eq + +fa++hk+FGasnv+kll++lp +er +a+ ++ yeA+ar++dP+yG+v++i++lqqq+ +l+a+l
  XP_022769854.1   7 PCGACKFLRRKCVRGCVFAPYFCHEQgATHFAAIHKVFGASNVSKLLTHLPVSERCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQL 101
                     7*************************89******************************************************************* PP

          DUF260  95 allkee 100
                     ++lke+
  XP_022769854.1 102 SSLKEQ 107
                     *99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MAGSSSPCGA CKFLRRKCVR GCVFAPYFCH EQGATHFAAI HKVFGASNVS KLLTHLPVSE  60
RCEAAVTISY EAQARLQDPI YGCVSHIFAL QQQVVNLQAQ LSSLKEQAAQ SVLHASVTAN  120
PNDKYLGKLP SELQDVPSWF HPDNSSMAPN FNPNFSNHPS TSSYCENGFL DPTSLGNYEN  180
SVISSSGEDR VSYTTFGEAP HPSFDMQTNN RQWTFQDADD LQSMAFGYSQ HS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.14e-59LBD family protein