PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022769866.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 271aa MW: 31138.7 Da PI: 4.9651

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022769866.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.1	9.7e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d++k++G g+W++ ++ g+ R++k+c++rw +yl XP_022769866.1 14 KGPWTPEEDQILIDYIKLYGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	50.5	4.9e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE+ ++++++ lG++ W++Ia++++ gRt++++k+ w+++l XP_022769866.1 67 RGNFTREEENTIINLHETLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MVRAPCCEKM GLKKGPWTPE EDQILIDYIK LYGHGNWRAL PKQAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF TREEENTIIN LHETLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLKQNH 120 GFNVNEHQVI DSSKDTQKEQ EPVNFLSPVT ADRPGYREVS PPESSSEVST LTTSENNSNM 180 CMKIEMHEDF SEIDENFWSE VLSADNSSMA SDFQVVGSDP QPHQYFPSSP LASLEPVNDY 240 YASNLYDIDT NVDFWYDLFT RAGDLPELPE I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKRLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	9e-83	MYB family protein