PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022769979.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 251aa MW: 29044.2 Da PI: 9.7624

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022769979.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	93.1	1.4e-29	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien++ rqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+eyss XP_022769979.1 10 RIENNTSRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSNRGKLFEYSS 59 8***********************************************96 PP
2	K-box	91.7	1.3e-30	85	174	11	100
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ +++++ e +kL + +e Lqr++Rh+lGe+L++Lsl++L+ Leqq+++slk+iR++Kn+l+le+i+elqkkek lq++n++L k+l+e XP_022769979.1 85 SESQANSTLECNKLMSTVEALQRNLRHFLGEELDPLSLRDLKLLEQQIDNSLKRIRTRKNKLMLESISELQKKEKTLQDQNNMLAKNLKE 174 566789999****************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MGRGRVQLRR IENNTSRQVT FSKRRTGLLK KAHEISVLCD AEVALIVFSN RGKLFEYSSE 60 SRMERILERY ERQSYSERLL VPTGSESQAN STLECNKLMS TVEALQRNLR HFLGEELDPL 120 SLRDLKLLEQ QIDNSLKRIR TRKNKLMLES ISELQKKEKT LQDQNNMLAK NLKEYEKRLP 180 EHAQCEHQNY AQNSSWSIVQ PPPPPATIQF PSLTIGGCYQ AIEGITKEAE TQPQPSISTV 240 IPPWMLRHLN R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69120.1	2e-75	MIKC_MADS family protein