PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022769989.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 310aa    MW: 35370.9 Da    PI: 6.1716
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022769989.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.71.7e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l++ +   G  +W+++++  g+ R++k+c++rw +yl
   XP_022769989.1 14 KGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding54.13.7e-1770111447
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       ++ E++  +d+++qlG++ W++Ia++++ gRt++++k++w+++
   XP_022769989.1  70 LSEHEEQMVIDLHAQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 111
                      5899***************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MGRQPCCDKV GLKKGPWTAE EDKKLINFIL TNGQCCWRAV PKLAGLLRCG KSCRLRWTNY  60
LRPDLKRGLL SEHEEQMVID LHAQLGNRWS KIASHLPGRT DNEIKNHWNT HIKKKLRKMG  120
IDPLTHKPLS TTEQQQQQQQ QEQKKQIPKP AVKSQVDKTK EPETSIQSTI TEAKEEDKIM  180
TSRLFDPMEM MNNIDGFCTD EVPLIEPHEI LVPSAPSTTS SSSSSCDSSK FLEELQFPDF  240
EWPSDYNTSS CNNSNNISNN LSFWDDYFGG WDLIINDDSD RNPALGSLPS PLIQCPRMGF  300
DQGSWTYDLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16600.16e-97MYB family protein